| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yeeJ [C]
Identifier: 156977047
GI number: 156977047
Start: 1015463
End: 1018006
Strand: Reverse
Name: yeeJ [C]
Synonym: VIBHAR_05832
Alternate gene names: 156977047
Gene position: 1018006-1015463 (Counterclockwise)
Preceding gene: 156977048
Following gene: 156977046
Centisome position: 46.19
GC content: 49.88
Gene sequence:
>2544_bases GTGGAGAGAAGAGAAATGTGGCGAAAATCGATAGCAAGCTTGTTATTGCTTGTATTGTTTGGATGTGGCGGAGAAGGGGA TAAAGGGGATAACGCCTCCACCGCCACCGATAATGTTCTGGCGCCTTTAGCCAGTGATGCCTTTAACCAGTTGTCAATGG CGGATGGTCAAACGCAAGTGTCTTTGAAAGAATCGGTGGTTGACCCGCAAGGATTGCCGGTGACACTGGAGTCGGTGACG GTGAGTCATGCTGATTGTCCAGCGCCCACGAGCATCAATCGAGAGCAACTCAGCTTTACGGTCGAAGCGAATGGGCCCGA CATGTGTTTTTATGGTTATACGGTCAAAAACCATCCCAAAGAGATCGAGCACGCGAAGTCTGCGAGTGCGCAAAGCAATG TGATGATAAACTTGACCTCAGACCCCGCGCAGTTGGCACCAAAATCTAGGACGACGAATGTGGATGAGACCATCAAGATA GAGGTGCGTGACCCGGATTTAACCGCCGGTTATACCCTCGACCGTGAGGTTGTGGTGATGGGTGATGGCGTCGCCAGTGG TAATAGCGAGACGGATGTAATCACTTATGAGGCGAACTCTCAGGGGGTGACACGTTTGGTGTACACCATGACGAACGCCG ATGGCAGTGCGCTTTTAGTGGGGACGGTTGACGTGGCGGTGTCAGGCCCCGGAAATCATGCGCCAGTGGCGACAGATGCG TCGTTTAGGATGGAATCTGATGACATCGAATCGCCCCAAACGCCCCAAGCATTTAACCTCAGTGCTTATGTTAGTGATGA GAATGATGGTGATGACATCCAGCTTATTCTAGTTGACGCGTGGAATGCGCAGGTTGATTTAGCGGCGCCGGATGACACTA GCAATCTTTCGTTTACCTTTAAACCGCGCCATGCTGGGTTTCACTATGTGACGTATGTGGTGACTGACCATAAAGGCGGT TATGGTGTCGCGCAAGTAAAAATTGAGGTGGTTGACCTCTCTACGGGGGCGACATGGGGAAATATCCAGATGGGGCTTAA ATTGTTTTTTGGTCCATTGACGAGCTCAGAAGCAGATTTACAAGGAGTCACTTCTACGAGTTCTAATTTTGATAGTAATG ATGCTGACGTGGCGACGTTTAACTTCGTTCGCGCTGAAGATTCCTGTCAAAGTAAGGGGCGCTTGCCGACTTCTGATGAA CTAAAGGCGCTTGCCCAATACATAATTTCCGACGGTTGGCCGGTGGATTTGGCTTATTGGGCGAATAATAATGGTACTGG TGAGCTGATTGATTTGAAGAACAACGGGTCAGTGGTACCGGAAACCAACCCTGGTGGTTACTATGTGTCTTGCATGAATG AAGCGGGCCTTGTTGTGGTGGACGCCGATTCTAGGCTTGAGGCGGTAGCGGATGATGCCGAACAGGCAGTCGTAGCGGTG AAGCTGACTCTGGACGATATGCCCGTAGAAGGTCAGTTGATTGAGGCGTCAGCCCCCGACCGGACTAATGTGACCTTTGA CGATACAACTCTCTATACAAACAACAAAGGGGTAGCCAAGTTTGCCTTAAACACTTGGGAAGCAGGGCAGGTTCCGGTCA ATATCAAGTACGACGGCGAAACGGTGTTGACGCAAAATGTGACGTTTGTTGCGGATGAAGCTACTGCTCGTTTAGTGCTT GAGGTAACCAAAAATCATGCATCATATGATGATTCAACTGGTAATGAGGTTGAGGCTACAATGTTGGTCTACACTAACAA TCCGTTGGTGGGGCGCCCGGTAACCTTTACGTCGCCTGAGGAACAATCTGTCACCATTAATAAGGGCTCTGAAGTTACGG ATGCTACGGGTAAGCAGAACGCATCAGTGGTTTGGAAGGATAGTTCGACAACTGATACCTCTACAACTGTTACTGTCACC GGAAGTTATACCCCCCAATCTACGGGAACTCCAATTTCAGATACCGCCGAGATAACGTTTATTCCACTGAGGACTTGTGG TGGAAGAATAAACGACACCAACAAAAGCAATGCTACAGGCAACTGTCTGAAAATTGCTACTGGTGCTCTTGGATACTGGT TTACCAGCACGCCAAGCATTGCAGTGATGGACCAGCTTGGGTATAGCATAAACGAAGAGGGCAACAACACTGGTGATACA TATGCAGGTTTGGTCACCGAGGATGGAAAGTATGGGCCTGCCGGTGGTGAGTTTGCGCTATTTGTGCAGACTGGTGATGG TGTCCCTATCCCTGATAGACCTAATGCAGGTGTTAACGGGCAGTTTGACCGTTGGTGCCAAAAGCTTAATGATTTAGAGT TTGGTGGAAGAACAACATGGGAGCGCCCAACAATGGATGAGTTGAGGACACTTCAGGACCGTGGCGACCTGTGGGCAACG CATGGTTGGCCGGCCCGGGCCTTTTACTGGTCGTCGGAGGCCAATGGTATCAACTTTAACATTCTATCCCTGAAAAATTA CTACGACAGCTGGAACCGACCCTGGGTAGGGTACGCCGCGTCCTGCGTCTCAAAACATCCTTAG
Upstream 100 bases:
>100_bases AGCGTGAGGATGGACTCATGATTGCAACGCGAACCTTGCTTGTGATGGTGGCTTATATGATAGCCGCGAATGTGTTGATG CTCATCGCCTTTGGCGCATA
Downstream 100 bases:
>100_bases TGTTTTACGTTCAGCGTTTAACGTTTAAATTTTAATATTTTTGGCGCCATCCTTATGGTTGGCGCCTTATTCTCGGAGTT TATTTTGTGAATATTGAATG
Product: peptidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVTLESVT VSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETIKI EVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAPVATDA SFRMESDDIESPQTPQAFNLSAYVSDENDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPRHAGFHYVTYVVTDHKGG YGVAQVKIEVVDLSTGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDE LKALAQYIISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQAVVAV KLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNNKGVAKFALNTWEAGQVPVNIKYDGETVLTQNVTFVADEATARLVL EVTKNHASYDDSTGNEVEATMLVYTNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVT GSYTPQSTGTPISDTAEITFIPLRTCGGRINDTNKSNATGNCLKIATGALGYWFTSTPSIAVMDQLGYSINEEGNNTGDT YAGLVTEDGKYGPAGGEFALFVQTGDGVPIPDRPNAGVNGQFDRWCQKLNDLEFGGRTTWERPTMDELRTLQDRGDLWAT HGWPARAFYWSSEANGINFNILSLKNYYDSWNRPWVGYAASCVSKHP
Sequences:
>Translated_847_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVTLESVT VSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETIKI EVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAPVATDA SFRMESDDIESPQTPQAFNLSAYVSDENDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPRHAGFHYVTYVVTDHKGG YGVAQVKIEVVDLSTGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDE LKALAQYIISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQAVVAV KLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNNKGVAKFALNTWEAGQVPVNIKYDGETVLTQNVTFVADEATARLVL EVTKNHASYDDSTGNEVEATMLVYTNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVT GSYTPQSTGTPISDTAEITFIPLRTCGGRINDTNKSNATGNCLKIATGALGYWFTSTPSIAVMDQLGYSINEEGNNTGDT YAGLVTEDGKYGPAGGEFALFVQTGDGVPIPDRPNAGVNGQFDRWCQKLNDLEFGGRTTWERPTMDELRTLQDRGDLWAT HGWPARAFYWSSEANGINFNILSLKNYYDSWNRPWVGYAASCVSKHP >Mature_847_residues MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLAPLASDAFNQLSMADGQTQVSLKESVVDPQGLPVTLESVT VSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPKEIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETIKI EVRDPDLTAGYTLDREVVVMGDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAPVATDA SFRMESDDIESPQTPQAFNLSAYVSDENDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTFKPRHAGFHYVTYVVTDHKGG YGVAQVKIEVVDLSTGATWGNIQMGLKLFFGPLTSSEADLQGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDE LKALAQYIISDGWPVDLAYWANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQAVVAV KLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNNKGVAKFALNTWEAGQVPVNIKYDGETVLTQNVTFVADEATARLVL EVTKNHASYDDSTGNEVEATMLVYTNNPLVGRPVTFTSPEEQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVT GSYTPQSTGTPISDTAEITFIPLRTCGGRINDTNKSNATGNCLKIATGALGYWFTSTPSIAVMDQLGYSINEEGNNTGDT YAGLVTEDGKYGPAGGEFALFVQTGDGVPIPDRPNAGVNGQFDRWCQKLNDLEFGGRTTWERPTMDELRTLQDRGDLWAT HGWPARAFYWSSEANGINFNILSLKNYYDSWNRPWVGYAASCVSKHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91050; Mature: 91050
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1 L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLAPLASDAFNQLSMADGQTQV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE SLKESVVDPQGLPVTLESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPK EHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEECCCCH EIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETIKIEVRDPDLTAGYTLDREVVVM HHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEECCEEEEE GDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAPVATDA ECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCEECCC SFRMESDDIESPQTPQAFNLSAYVSDENDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTF CEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEEEE KPRHAGFHYVTYVVTDHKGGYGVAQVKIEVVDLSTGATWGNIQMGLKLFFGPLTSSEADL CCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCC QGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDELKALAQYIISDGWPVDLAYW CEEECCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE ANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQAVVAV ECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCEEEEE KLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNNKGVAKFALNTWEAGQVPVNIKYDGE EEEECCCCCCCEEEECCCCCCCCEEECCEEEEECCCCEEEEEEECCCCCCEEEEEEECCC TVLTQNVTFVADEATARLVLEVTKNHASYDDSTGNEVEATMLVYTNNPLVGRPVTFTSPE EEEEECEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCC EQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVTGSYTPQSTGTPISDTAEITF CCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE IPLRTCGGRINDTNKSNATGNCLKIATGALGYWFTSTPSIAVMDQLGYSINEEGNNTGDT EEEHHCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCEEEHHHCCCEECCCCCCCCCE YAGLVTEDGKYGPAGGEFALFVQTGDGVPIPDRPNAGVNGQFDRWCQKLNDLEFGGRTTW EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC ERPTMDELRTLQDRGDLWATHGWPARAFYWSSEANGINFNILSLKNYYDSWNRPWVGYAA CCCCHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCEEEEEEEEEHHHCCCCCCCHHHHH SCVSKHP HHHCCCC >Mature Secondary Structure MERREMWRKSIASLLLLVLFGCGGEGDKGDNASTATDNVLAPLASDAFNQLSMADGQTQV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE SLKESVVDPQGLPVTLESVTVSHADCPAPTSINREQLSFTVEANGPDMCFYGYTVKNHPK EHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEECCCCH EIEHAKSASAQSNVMINLTSDPAQLAPKSRTTNVDETIKIEVRDPDLTAGYTLDREVVVM HHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEECCEEEEE GDGVASGNSETDVITYEANSQGVTRLVYTMTNADGSALLVGTVDVAVSGPGNHAPVATDA ECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCEECCC SFRMESDDIESPQTPQAFNLSAYVSDENDGDDIQLILVDAWNAQVDLAAPDDTSNLSFTF CEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEEEE KPRHAGFHYVTYVVTDHKGGYGVAQVKIEVVDLSTGATWGNIQMGLKLFFGPLTSSEADL CCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCC QGVTSTSSNFDSNDADVATFNFVRAEDSCQSKGRLPTSDELKALAQYIISDGWPVDLAYW CEEECCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE ANNNGTGELIDLKNNGSVVPETNPGGYYVSCMNEAGLVVVDADSRLEAVADDAEQAVVAV ECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCEEEEE KLTLDDMPVEGQLIEASAPDRTNVTFDDTTLYTNNKGVAKFALNTWEAGQVPVNIKYDGE EEEECCCCCCCEEEECCCCCCCCEEECCEEEEECCCCEEEEEEECCCCCCEEEEEEECCC TVLTQNVTFVADEATARLVLEVTKNHASYDDSTGNEVEATMLVYTNNPLVGRPVTFTSPE EEEEECEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCC EQSVTINKGSEVTDATGKQNASVVWKDSSTTDTSTTVTVTGSYTPQSTGTPISDTAEITF CCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEE IPLRTCGGRINDTNKSNATGNCLKIATGALGYWFTSTPSIAVMDQLGYSINEEGNNTGDT EEEHHCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCEEEHHHCCCEECCCCCCCCCE YAGLVTEDGKYGPAGGEFALFVQTGDGVPIPDRPNAGVNGQFDRWCQKLNDLEFGGRTTW EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC ERPTMDELRTLQDRGDLWATHGWPARAFYWSSEANGINFNILSLKNYYDSWNRPWVGYAA CCCCHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCEEEEEEEEEHHHCCCCCCCHHHHH SCVSKHP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA