Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is phnA [C]

Identifier: 156977035

GI number: 156977035

Start: 1008126

End: 1008683

Strand: Direct

Name: phnA [C]

Synonym: VIBHAR_05820

Alternate gene names: 156977035

Gene position: 1008126-1008683 (Clockwise)

Preceding gene: 156977034

Following gene: 156977036

Centisome position: 45.74

GC content: 45.34

Gene sequence:

>558_bases
ATGTCTATCGAAGCTACTCTGCTTGCTCGCTGCGAGTCAAAATGTGAACTGTGTTCTTCTGAATCTCAACTAACTGCTTA
CGCTGTGCCACCACACGGTAACGTAACGGTTGATACTGCTATCATGGTTTGTGATAAGTGTCATGGTGAGATCGAAGAGC
CTAAAGACATTAACCACTGGCGCTGCTTGAACGACAGCATGTGGAGTCAGGTTCCTGCGGTACAAGTAACTGCATGGCGC
CAACTTACTCGCCTAAACACAGAAAGCTGGGCTCAAGACGCTCTTGACATGATGTACATGGAAGAAGAGCAAATGAACTG
GGCTATGAAAGGTATGTCTGCTGACGACAAAACTGTTGACTGCAACGGCACTGAACTTAAAAAAGGTGACGACGTAACAG
TAATCAAAGACCTACCAGTTAAAGGTACAAACCAAGTAATCAAACAAGGTACTGTTATTCGCGGTATCAGCCTTGGTGAT
GATCCTAAACTTGTTTCAGGTAAGGCAAACGGCGGTCAGTCAATGTACGTGATCGCAGAATACTGCCGTAAGAAGTAA

Upstream 100 bases:

>100_bases
ATATTGTAAAATCTCGCCTTTAATTCTCTAACACCCTTTTATTTCTCAGGATAAAGTGGATAATACCGCCACCAAAAAAA
CATTACTAAGGTGAGTCCTT

Downstream 100 bases:

>100_bases
TCTCAACATTACTTTCGAGATTAAACGGGGTTCCAATTGGAACCCCGTTTTCGTTTTTGCATCCTCTTGTCTTCCTCTCC
CTTCCTTTGACCCGCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: PhnA Protein-Like Protein; Zn-Ribbon-Containing Protein; Alkylphosphonate Uptake Protein; Protein PhnA; Protein Involved In Phosphonate Metabolism; Phosphonate Metabolism Zn-Ribbon-Containing Protein; Phosphonoacetate Hydrolase; Phosphonoacetate Hydrolase PhnA; Phna Protein

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSIEATLLARCESKCELCSSESQLTAYAVPPHGNVTVDTAIMVCDKCHGEIEEPKDINHWRCLNDSMWSQVPAVQVTAWR
QLTRLNTESWAQDALDMMYMEEEQMNWAMKGMSADDKTVDCNGTELKKGDDVTVIKDLPVKGTNQVIKQGTVIRGISLGD
DPKLVSGKANGGQSMYVIAEYCRKK

Sequences:

>Translated_185_residues
MSIEATLLARCESKCELCSSESQLTAYAVPPHGNVTVDTAIMVCDKCHGEIEEPKDINHWRCLNDSMWSQVPAVQVTAWR
QLTRLNTESWAQDALDMMYMEEEQMNWAMKGMSADDKTVDCNGTELKKGDDVTVIKDLPVKGTNQVIKQGTVIRGISLGD
DPKLVSGKANGGQSMYVIAEYCRKK
>Mature_184_residues
SIEATLLARCESKCELCSSESQLTAYAVPPHGNVTVDTAIMVCDKCHGEIEEPKDINHWRCLNDSMWSQVPAVQVTAWRQ
LTRLNTESWAQDALDMMYMEEEQMNWAMKGMSADDKTVDCNGTELKKGDDVTVIKDLPVKGTNQVIKQGTVIRGISLGDD
PKLVSGKANGGQSMYVIAEYCRKK

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20551; Mature: 20419

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEATLLARCESKCELCSSESQLTAYAVPPHGNVTVDTAIMVCDKCHGEIEEPKDINHW
CCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHEEHHHHCCCCCCCCCCCCE
RCLNDSMWSQVPAVQVTAWRQLTRLNTESWAQDALDMMYMEEEQMNWAMKGMSADDKTVD
EECCCHHHHHCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEC
CNGTELKKGDDVTVIKDLPVKGTNQVIKQGTVIRGISLGDDPKLVSGKANGGQSMYVIAE
CCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEEECCCCCCCEEECCCCCCCEEEEEHH
YCRKK
HHCCC
>Mature Secondary Structure 
SIEATLLARCESKCELCSSESQLTAYAVPPHGNVTVDTAIMVCDKCHGEIEEPKDINHW
CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHEEHHHHCCCCCCCCCCCCE
RCLNDSMWSQVPAVQVTAWRQLTRLNTESWAQDALDMMYMEEEQMNWAMKGMSADDKTVD
EECCCHHHHHCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEC
CNGTELKKGDDVTVIKDLPVKGTNQVIKQGTVIRGISLGDDPKLVSGKANGGQSMYVIAE
CCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEEECCCCCCCEEECCCCCCCEEEEEHH
YCRKK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA