| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977013
Identifier: 156977013
GI number: 156977013
Start: 985077
End: 986510
Strand: Reverse
Name: 156977013
Synonym: VIBHAR_05798
Alternate gene names: NA
Gene position: 986510-985077 (Counterclockwise)
Preceding gene: 156977014
Following gene: 156977009
Centisome position: 44.76
GC content: 46.58
Gene sequence:
>1434_bases ATGAAGTCTGAGTTTCCAAATCGTAAAGATAAACACATCGCTATTATCGGTGGTGGAGTTGCGGGTTCAACTGCAGCCAT TCACTTTGCCGAGTTAGGTTTCAAAGTGTCCGTAATCGAAAAAGGCGTCTCTTTGGTCAATGGTCCTCCAATTTGTCATT TACATGCTGGTGGTAACCTTTATCGAGAGATTTCCGAGCAACAGTGCTTGGATCTTCTGGCTCAGTCTATCGATACGATC CGTTTGTATCCGCATTCACTGAATGTCCGTCCTACCTTAATCGCGGTTCCACATTCTGATGGAGGAGATCCGGAAGCGTT GTTACCGCGTTTAGAAGTCATCAAATCGGCGTATCAGAAGCTCGTTCAACAAGCGCCTGATAACAAAGTGCTTGGTGAGC CCGATGAGTACTACAAGCTGTACTCGAAAGCTGAACTTCTTGCGCTGGCGCAGCAAACACAACCGCAAAGTCCAAAGAGC ATTGATGAATGGTGTATTCCGTTTGCTCAACACGCTGATTTGGAAGCCCTTAAATATCCGGTCGTCGCAGTTCAGGAATA CGGATGGAGCGTATTCAGATTAGCTGCGGTTGCCAATATGACGCTAGATCAACTGCCTAATGTTGAGGTATTGACTCAAG CGGAACTTAAGCAAACCCATTGGGATGGTTCACATTGGGCGCTCAAATATCTTAAAGACGAAAAGCATCAGCTTTTAAGC TGCGACTACCTAATCAATGCTTGCGGTTTTGAAACTGGTACAGTGGATGACGCTATTGGCGTGAAACGCGAACGATTGGT TGAGTTTAAGGCGGCTTACGTTACGCGTTGGAATGAATGTACGCAGCAGTGGCCAGAAGTGATCTTCCATGGCCCTCGCG GTACCGACAAAGGCATGGCTCAATTAACGCCTTATGGTGACGGTTACTTCCAATTGCACGGTATGACAAAAGGCATCACA TTATTTGATGACGGCTTGGTGGAGAGCTCTAACACTTCTGCACAGCCAGAGCTGCCGACACAATTGTTGTCTAAGATTCG AAATGGTTGGCGACAAGAAATCCTAGATGAGCGTACAGGCAATGCGATTAAGCACATGGCTCAGTTTATTCCGGATTACA AAAATGCCGTTAAGGGTGGCAAAGCGCTATTTGGAGCGCAACAAATCCCGGGAACCGATCCTGTATTGCGTGCCGCTGAC GTGACATTTGAAGAGAATAATTACGCTCGAATCGAAGTCGTTAAGGCTTCTTCTACCTTACTTGCCGCACAAAAGATGGC AAAACATTGGTTTGGGGTTGAGCCTGAATCTAATGTTGAAACGCAACACCCAGTCACTGTGCATTGGAGTGAAAAAGAAG TAGAACAGTTTGCGATTAAACTGACTCAAGAACGCGGCTACCCTCAAGCACTAGCAGAGCGTTACGGCATGTAA
Upstream 100 bases:
>100_bases AAATGCAAACCCATGAACTTTTTGTGATTTTAATCATGCTCAAACCCGAGTAGAATCATACTAAGTAAAGATTTCTCCTT ATAAAATTTTCAGTGAAGCA
Downstream 100 bases:
>100_bases CGCTCACATTTGTTTTTCAATTTGGTGTGTTTCAATCTGGGCTCGGCTATCTTACTAATAACCAAAGAATTGAGCCCATT GGCACCACACATCTTGCAGA
Product: oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Exported Oxidoreductase
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MKSEFPNRKDKHIAIIGGGVAGSTAAIHFAELGFKVSVIEKGVSLVNGPPICHLHAGGNLYREISEQQCLDLLAQSIDTI RLYPHSLNVRPTLIAVPHSDGGDPEALLPRLEVIKSAYQKLVQQAPDNKVLGEPDEYYKLYSKAELLALAQQTQPQSPKS IDEWCIPFAQHADLEALKYPVVAVQEYGWSVFRLAAVANMTLDQLPNVEVLTQAELKQTHWDGSHWALKYLKDEKHQLLS CDYLINACGFETGTVDDAIGVKRERLVEFKAAYVTRWNECTQQWPEVIFHGPRGTDKGMAQLTPYGDGYFQLHGMTKGIT LFDDGLVESSNTSAQPELPTQLLSKIRNGWRQEILDERTGNAIKHMAQFIPDYKNAVKGGKALFGAQQIPGTDPVLRAAD VTFEENNYARIEVVKASSTLLAAQKMAKHWFGVEPESNVETQHPVTVHWSEKEVEQFAIKLTQERGYPQALAERYGM
Sequences:
>Translated_477_residues MKSEFPNRKDKHIAIIGGGVAGSTAAIHFAELGFKVSVIEKGVSLVNGPPICHLHAGGNLYREISEQQCLDLLAQSIDTI RLYPHSLNVRPTLIAVPHSDGGDPEALLPRLEVIKSAYQKLVQQAPDNKVLGEPDEYYKLYSKAELLALAQQTQPQSPKS IDEWCIPFAQHADLEALKYPVVAVQEYGWSVFRLAAVANMTLDQLPNVEVLTQAELKQTHWDGSHWALKYLKDEKHQLLS CDYLINACGFETGTVDDAIGVKRERLVEFKAAYVTRWNECTQQWPEVIFHGPRGTDKGMAQLTPYGDGYFQLHGMTKGIT LFDDGLVESSNTSAQPELPTQLLSKIRNGWRQEILDERTGNAIKHMAQFIPDYKNAVKGGKALFGAQQIPGTDPVLRAAD VTFEENNYARIEVVKASSTLLAAQKMAKHWFGVEPESNVETQHPVTVHWSEKEVEQFAIKLTQERGYPQALAERYGM >Mature_477_residues MKSEFPNRKDKHIAIIGGGVAGSTAAIHFAELGFKVSVIEKGVSLVNGPPICHLHAGGNLYREISEQQCLDLLAQSIDTI RLYPHSLNVRPTLIAVPHSDGGDPEALLPRLEVIKSAYQKLVQQAPDNKVLGEPDEYYKLYSKAELLALAQQTQPQSPKS IDEWCIPFAQHADLEALKYPVVAVQEYGWSVFRLAAVANMTLDQLPNVEVLTQAELKQTHWDGSHWALKYLKDEKHQLLS CDYLINACGFETGTVDDAIGVKRERLVEFKAAYVTRWNECTQQWPEVIFHGPRGTDKGMAQLTPYGDGYFQLHGMTKGIT LFDDGLVESSNTSAQPELPTQLLSKIRNGWRQEILDERTGNAIKHMAQFIPDYKNAVKGGKALFGAQQIPGTDPVLRAAD VTFEENNYARIEVVKASSTLLAAQKMAKHWFGVEPESNVETQHPVTVHWSEKEVEQFAIKLTQERGYPQALAERYGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53215; Mature: 53215
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEFPNRKDKHIAIIGGGVAGSTAAIHFAELGFKVSVIEKGVSLVNGPPICHLHAGGNL CCCCCCCCCCCEEEEEECCCCCCHHHEEHHHHCCEEEHHHHCHHHCCCCCEEEEECCCHH YREISEQQCLDLLAQSIDTIRLYPHSLNVRPTLIAVPHSDGGDPEALLPRLEVIKSAYQK HHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LVQQAPDNKVLGEPDEYYKLYSKAELLALAQQTQPQSPKSIDEWCIPFAQHADLEALKYP HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCCHHHHHCC VVAVQEYGWSVFRLAAVANMTLDQLPNVEVLTQAELKQTHWDGSHWALKYLKDEKHQLLS CEEHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHH CDYLINACGFETGTVDDAIGVKRERLVEFKAAYVTRWNECTQQWPEVIFHGPRGTDKGMA HHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCE QLTPYGDGYFQLHGMTKGITLFDDGLVESSNTSAQPELPTQLLSKIRNGWRQEILDERTG EECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NAIKHMAQFIPDYKNAVKGGKALFGAQQIPGTDPVLRAADVTFEENNYARIEVVKASSTL HHHHHHHHHCCHHHHHHCCCHHEECCCCCCCCCCHHHHCCCEEECCCEEEEEEEECCHHH LAAQKMAKHWFGVEPESNVETQHPVTVHWSEKEVEQFAIKLTQERGYPQALAERYGM HHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MKSEFPNRKDKHIAIIGGGVAGSTAAIHFAELGFKVSVIEKGVSLVNGPPICHLHAGGNL CCCCCCCCCCCEEEEEECCCCCCHHHEEHHHHCCEEEHHHHCHHHCCCCCEEEEECCCHH YREISEQQCLDLLAQSIDTIRLYPHSLNVRPTLIAVPHSDGGDPEALLPRLEVIKSAYQK HHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LVQQAPDNKVLGEPDEYYKLYSKAELLALAQQTQPQSPKSIDEWCIPFAQHADLEALKYP HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCCHHHHHCC VVAVQEYGWSVFRLAAVANMTLDQLPNVEVLTQAELKQTHWDGSHWALKYLKDEKHQLLS CEEHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHH CDYLINACGFETGTVDDAIGVKRERLVEFKAAYVTRWNECTQQWPEVIFHGPRGTDKGMA HHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCE QLTPYGDGYFQLHGMTKGITLFDDGLVESSNTSAQPELPTQLLSKIRNGWRQEILDERTG EECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NAIKHMAQFIPDYKNAVKGGKALFGAQQIPGTDPVLRAADVTFEENNYARIEVVKASSTL HHHHHHHHHCCHHHHHHCCCHHEECCCCCCCCCCHHHHCCCEEECCCEEEEEEEECCHHH LAAQKMAKHWFGVEPESNVETQHPVTVHWSEKEVEQFAIKLTQERGYPQALAERYGM HHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA