| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yfiQ [H]
Identifier: 156977002
GI number: 156977002
Start: 971533
End: 974166
Strand: Direct
Name: yfiQ [H]
Synonym: VIBHAR_05787
Alternate gene names: 156977002
Gene position: 971533-974166 (Clockwise)
Preceding gene: 156976997
Following gene: 156977004
Centisome position: 44.08
GC content: 47.04
Gene sequence:
>2634_bases ATGAATAAGCTACAAAAACTCTTCAAACCGAATTCTGTTGCTGTGATTGGCGCATCTCAAAAAGCGCTGCGCGCAGGCCA AATTGTAATGCGTAATTTGTTTCAAAGTGGTTTTGACGGCGCGATCATGCCGGTGACACCAAAATACAAATCGGTGTCCG GTGTTATTGCTTATCCAAATATTGCTTCCCTGCCCTATACCCCTGATATCGCCATCCTCTGTACTAATGTGGCACGCAAT AAGAAGTTACTGAAAGAACTGGATGAGCGAGGGACAGAATTCGCGATTGTTATTTCTGACGATGCCGAAAACATCGATGT TGCTGACTTAAACATCCGAGTCATTGGGCCAAACAGTCTTGGCGTTATTCTTCCTTGGCATAACTTCAATTGCTCGTTTT CTCCTGTTGCTGCGTTACCCGGCAAGATTGCTTTTATCTCTCAATCCGCAGCCGTTTGCACAACGGTATTAGATTGGGCG AATGACAAGAATATCGGTTTCTCCTCTTTTATTTCTATTGGCCAAGGACAAGATGTTGATTTTGCTGAATTGCTCGATTA CTTAAGTATGGATGCAAAAACAGAGGCCATTCTTCTTTACGTGGATACGATTAAAGATGCGCGCCGCTTCATGTCTGCTG CTCGTGCAGCCTCTCGTAACCGACGCATTTTGGTTTTGAAAGCCGGTAAATCGACTCAGGCTAGAACTCTGGGTGATCAA GACGTTGATTCGTTGGATGTGATTTATGACTCGGCGATTCGTAGAACCGGTATGCTACGCGTAGGTAACACCCACGAATT GTTTGCCGCTGTAGAAACTCTGACCCACTCTGTTCCACTTCGTGGTGAACGTCTTGCGATCATTACTAACGGTGGCGGAC CTGCTGTTATGGCAGTAGATACGTTGCTAGAACGCGGCGGTAAGCTTGCTTCACTTGATGAGGTATCTGCCGATCAGTTA AGCAAGGTATTACCAACCAATTGGCGTGGTGTGAACCCAATCGATCTTGCGGGTGATGCGACGAAAAAGCGCTATGTCGA TACGATAAACACGCTCATGAATAATGACTGTGCCGATGCGATTTTGATCATGCACAGTCCTTCTGCTGTGTCTGACTCTT TGGAAACCGCCCACGCGGTAATTGAAGCTATTCAAGCCCATGCGAGACACAAACACTTTAATATTCTGACTAATTGGTCG GGCGAACAAACCTCTCGGGAAGCTCGTCTTGCGTTCACTCAAGCTGGCATTCCTACTTACCGAACGCCAGAGAGTGCCGT TGTCGCTTACATGCACTTGGTCGAGTACAGGCGTAACCAAAAACAACTGATGGAAACACCAACGACGGCGGAACCGTTAC ACTCTGGTAGTGTGAATTCTGCGCGCGAGTGGGTCCGCGAACAATTACTGGATAAAAACACAGTAACACTAGACACCCAC CAATCCAGTCCATTATTTGAGCAGTTTGGTTTTCATATTCTCCCTACTTGGATCGCTTCGGAAGTCACAGAAGCCGTACA TATGGCAGAGAACATCGGCTATCCGGTGGCAGTAAAACTTCGCTCTCCTGACATTCCTCATAAATCGGATGTACACGGTG TCGCACTTAACCTACGTAACAGCCAAGAAGTCTCGAGTGCCGCACAAGCGATCTTAGACACTGCGAAGCTCAGTTACCCT GCCGCGAATCTTCAAGGCCTTTTGGTGCAAGGGATGGCGAAGCTTGGTAGCGCCGAAGAGTTGCGCGTCAGTATCGCGGT GGACAAGGTGTTCGGGCCGGTGATCTTACTTGGGCAAGGTGGTTCAGATTGGAATATCACGCAAGATGCGGTCGCTGCCC TGCCTCCGCTCAATATGAACCTGGCACGCTACTTAATCGTCATTGCACTGAAATTAGGTAAGGTTCGATTACAGAAACAT AAAGATGCGCTGGACATCACCGAACTGTCTAAGTTCTTAGTTCGTATCTCTCAAATGGCGGTTGAGTTGCCAGAAATAGA AAGACTGGATATACATCCAGCACTCGTATCTGGTAGCGATTTAACCATTATTGATGCCGACGTAACATTGAAGCAATACA AAGGTGATGCGCAAGAACGGTTAGCGATTCGTCCTTTCCCTGCCGAGTTTGTTGAAACCGTCACATTGAGAGATGGTCAG CCTATTCTACTTCGTCCTATTTTGCCGGAAGACGAGCCAATCCACGCAGAGTTCATTAATAGTGTCTCTAAAGAAGATCT GTACAACCGATTCTTTTCTGACGTGGGCGAATTCAACCATGAAGCGCTCGCGAACCTCACTCAAATCGATTACGACCGAG AAATGGCGTTTGTTGCAGTGGCGTTTGATGAGAACGGTCCTTCTATCATAGGTGTAGCGCGTGCGCTGATTACTCCGGAC AACAGCGATGCAGAGTTTGCCATTTTGGTGCGTTCAGATTTAAAAGGAAAAGGTTTAGGCAAAGTGTTGATGCAAAAGAT CATTACTTACTGCCAAGCGAAAGGCACAAAGCAGATGTCTGGTATGACAATGCCAACCAACCGAGGCATGTTGTCACTCG CGCAAAGTTTGGGTTTTGAATTGGATGTACAGTTCGCTGATGGTACTGCCGATATGATTCTTCCTCTCAACTAA
Upstream 100 bases:
>100_bases ACCAATGTCTGGCTTGTTCATATTTAAAGAGAAGCTTATTCGTTTATGATTGTATGAGGAATGACCGACCGTTCTCGTCG TCGATGGCAAAGGAGTCACA
Downstream 100 bases:
>100_bases TTGAGTCCTATCAAGAGAAAGATCGGCATAACTGATTAAAAATAAATAAAGGGACGCTCAATCGCGTCCCTTTGTTGAGC GAACTTACTGTTTGCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 877; Mature: 877
Protein sequence:
>877_residues MNKLQKLFKPNSVAVIGASQKALRAGQIVMRNLFQSGFDGAIMPVTPKYKSVSGVIAYPNIASLPYTPDIAILCTNVARN KKLLKELDERGTEFAIVISDDAENIDVADLNIRVIGPNSLGVILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDWA NDKNIGFSSFISIGQGQDVDFAELLDYLSMDAKTEAILLYVDTIKDARRFMSAARAASRNRRILVLKAGKSTQARTLGDQ DVDSLDVIYDSAIRRTGMLRVGNTHELFAAVETLTHSVPLRGERLAIITNGGGPAVMAVDTLLERGGKLASLDEVSADQL SKVLPTNWRGVNPIDLAGDATKKRYVDTINTLMNNDCADAILIMHSPSAVSDSLETAHAVIEAIQAHARHKHFNILTNWS GEQTSREARLAFTQAGIPTYRTPESAVVAYMHLVEYRRNQKQLMETPTTAEPLHSGSVNSAREWVREQLLDKNTVTLDTH QSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAVKLRSPDIPHKSDVHGVALNLRNSQEVSSAAQAILDTAKLSYP AANLQGLLVQGMAKLGSAEELRVSIAVDKVFGPVILLGQGGSDWNITQDAVAALPPLNMNLARYLIVIALKLGKVRLQKH KDALDITELSKFLVRISQMAVELPEIERLDIHPALVSGSDLTIIDADVTLKQYKGDAQERLAIRPFPAEFVETVTLRDGQ PILLRPILPEDEPIHAEFINSVSKEDLYNRFFSDVGEFNHEALANLTQIDYDREMAFVAVAFDENGPSIIGVARALITPD NSDAEFAILVRSDLKGKGLGKVLMQKIITYCQAKGTKQMSGMTMPTNRGMLSLAQSLGFELDVQFADGTADMILPLN
Sequences:
>Translated_877_residues MNKLQKLFKPNSVAVIGASQKALRAGQIVMRNLFQSGFDGAIMPVTPKYKSVSGVIAYPNIASLPYTPDIAILCTNVARN KKLLKELDERGTEFAIVISDDAENIDVADLNIRVIGPNSLGVILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDWA NDKNIGFSSFISIGQGQDVDFAELLDYLSMDAKTEAILLYVDTIKDARRFMSAARAASRNRRILVLKAGKSTQARTLGDQ DVDSLDVIYDSAIRRTGMLRVGNTHELFAAVETLTHSVPLRGERLAIITNGGGPAVMAVDTLLERGGKLASLDEVSADQL SKVLPTNWRGVNPIDLAGDATKKRYVDTINTLMNNDCADAILIMHSPSAVSDSLETAHAVIEAIQAHARHKHFNILTNWS GEQTSREARLAFTQAGIPTYRTPESAVVAYMHLVEYRRNQKQLMETPTTAEPLHSGSVNSAREWVREQLLDKNTVTLDTH QSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAVKLRSPDIPHKSDVHGVALNLRNSQEVSSAAQAILDTAKLSYP AANLQGLLVQGMAKLGSAEELRVSIAVDKVFGPVILLGQGGSDWNITQDAVAALPPLNMNLARYLIVIALKLGKVRLQKH KDALDITELSKFLVRISQMAVELPEIERLDIHPALVSGSDLTIIDADVTLKQYKGDAQERLAIRPFPAEFVETVTLRDGQ PILLRPILPEDEPIHAEFINSVSKEDLYNRFFSDVGEFNHEALANLTQIDYDREMAFVAVAFDENGPSIIGVARALITPD NSDAEFAILVRSDLKGKGLGKVLMQKIITYCQAKGTKQMSGMTMPTNRGMLSLAQSLGFELDVQFADGTADMILPLN >Mature_877_residues MNKLQKLFKPNSVAVIGASQKALRAGQIVMRNLFQSGFDGAIMPVTPKYKSVSGVIAYPNIASLPYTPDIAILCTNVARN KKLLKELDERGTEFAIVISDDAENIDVADLNIRVIGPNSLGVILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDWA NDKNIGFSSFISIGQGQDVDFAELLDYLSMDAKTEAILLYVDTIKDARRFMSAARAASRNRRILVLKAGKSTQARTLGDQ DVDSLDVIYDSAIRRTGMLRVGNTHELFAAVETLTHSVPLRGERLAIITNGGGPAVMAVDTLLERGGKLASLDEVSADQL SKVLPTNWRGVNPIDLAGDATKKRYVDTINTLMNNDCADAILIMHSPSAVSDSLETAHAVIEAIQAHARHKHFNILTNWS GEQTSREARLAFTQAGIPTYRTPESAVVAYMHLVEYRRNQKQLMETPTTAEPLHSGSVNSAREWVREQLLDKNTVTLDTH QSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAVKLRSPDIPHKSDVHGVALNLRNSQEVSSAAQAILDTAKLSYP AANLQGLLVQGMAKLGSAEELRVSIAVDKVFGPVILLGQGGSDWNITQDAVAALPPLNMNLARYLIVIALKLGKVRLQKH KDALDITELSKFLVRISQMAVELPEIERLDIHPALVSGSDLTIIDADVTLKQYKGDAQERLAIRPFPAEFVETVTLRDGQ PILLRPILPEDEPIHAEFINSVSKEDLYNRFFSDVGEFNHEALANLTQIDYDREMAFVAVAFDENGPSIIGVARALITPD NSDAEFAILVRSDLKGKGLGKVLMQKIITYCQAKGTKQMSGMTMPTNRGMLSLAQSLGFELDVQFADGTADMILPLN
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=878, Percent_Identity=52.3917995444191, Blast_Score=945, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 95816; Mature: 95816
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLQKLFKPNSVAVIGASQKALRAGQIVMRNLFQSGFDGAIMPVTPKYKSVSGVIAYPN CCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCC IASLPYTPDIAILCTNVARNKKLLKELDERGTEFAIVISDDAENIDVADLNIRVIGPNSL CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEECCCCC GVILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGQGQDVD EEEECCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC FAELLDYLSMDAKTEAILLYVDTIKDARRFMSAARAASRNRRILVLKAGKSTQARTLGDQ HHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC DVDSLDVIYDSAIRRTGMLRVGNTHELFAAVETLTHSVPLRGERLAIITNGGGPAVMAVD CCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHH TLLERGGKLASLDEVSADQLSKVLPTNWRGVNPIDLAGDATKKRYVDTINTLMNNDCADA HHHHCCCCEECHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE ILIMHSPSAVSDSLETAHAVIEAIQAHARHKHFNILTNWSGEQTSREARLAFTQAGIPTY EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHEEEEECCCCCC RTPESAVVAYMHLVEYRRNQKQLMETPTTAEPLHSGSVNSAREWVREQLLDKNTVTLDTH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECC QSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAVKLRSPDIPHKSDVHGVALNLRN CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECC SQEVSSAAQAILDTAKLSYPAANLQGLLVQGMAKLGSAEELRVSIAVDKVFGPVILLGQG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECC GSDWNITQDAVAALPPLNMNLARYLIVIALKLGKVRLQKHKDALDITELSKFLVRISQMA CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VELPEIERLDIHPALVSGSDLTIIDADVTLKQYKGDAQERLAIRPFPAEFVETVTLRDGQ HCCCCCCEEECCEEEECCCCEEEEECCEEHHHHCCCHHHCEEECCCCHHHHHEEEECCCC PILLRPILPEDEPIHAEFINSVSKEDLYNRFFSDVGEFNHEALANLTQIDYDREMAFVAV CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEE AFDENGPSIIGVARALITPDNSDAEFAILVRSDLKGKGLGKVLMQKIITYCQAKGTKQMS EECCCCCEEEEEHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHC GMTMPTNRGMLSLAQSLGFELDVQFADGTADMILPLN CCCCCCCCCHHHHHHHCCCEEEEEEECCCCCEEEECC >Mature Secondary Structure MNKLQKLFKPNSVAVIGASQKALRAGQIVMRNLFQSGFDGAIMPVTPKYKSVSGVIAYPN CCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCC IASLPYTPDIAILCTNVARNKKLLKELDERGTEFAIVISDDAENIDVADLNIRVIGPNSL CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEECCCCC GVILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGQGQDVD EEEECCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC FAELLDYLSMDAKTEAILLYVDTIKDARRFMSAARAASRNRRILVLKAGKSTQARTLGDQ HHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC DVDSLDVIYDSAIRRTGMLRVGNTHELFAAVETLTHSVPLRGERLAIITNGGGPAVMAVD CCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHH TLLERGGKLASLDEVSADQLSKVLPTNWRGVNPIDLAGDATKKRYVDTINTLMNNDCADA HHHHCCCCEECHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE ILIMHSPSAVSDSLETAHAVIEAIQAHARHKHFNILTNWSGEQTSREARLAFTQAGIPTY EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHEEEEECCCCCC RTPESAVVAYMHLVEYRRNQKQLMETPTTAEPLHSGSVNSAREWVREQLLDKNTVTLDTH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECC QSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAVKLRSPDIPHKSDVHGVALNLRN CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECC SQEVSSAAQAILDTAKLSYPAANLQGLLVQGMAKLGSAEELRVSIAVDKVFGPVILLGQG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECC GSDWNITQDAVAALPPLNMNLARYLIVIALKLGKVRLQKHKDALDITELSKFLVRISQMA CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VELPEIERLDIHPALVSGSDLTIIDADVTLKQYKGDAQERLAIRPFPAEFVETVTLRDGQ HCCCCCCEEECCEEEECCCCEEEEECCEEHHHHCCCHHHCEEECCCCHHHHHEEEECCCC PILLRPILPEDEPIHAEFINSVSKEDLYNRFFSDVGEFNHEALANLTQIDYDREMAFVAV CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEE AFDENGPSIIGVARALITPDNSDAEFAILVRSDLKGKGLGKVLMQKIITYCQAKGTKQMS EECCCCCEEEEEHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHC GMTMPTNRGMLSLAQSLGFELDVQFADGTADMILPLN CCCCCCCCCHHHHHHHCCCEEEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]