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The map label for this gene is yciH [H]

Identifier: 156976998

GI number: 156976998

Start: 968760

End: 969071

Strand: Reverse

Name: yciH [H]

Synonym: VIBHAR_05783

Alternate gene names: 156976998

Gene position: 969071-968760 (Counterclockwise)

Preceding gene: 156976999

Following gene: 156976996

Centisome position: 43.97

GC content: 44.55

Gene sequence:

>312_bases
ATGACACTCGTATATTCAACAAAGACTGGTCGCATCAAACCAGAAGAAGAAAAAGTCGAACGCCCTAAAGGCGACGGCAT
TGTTCGTATTCAACGACAAACTAAAGGCCGTAAAGGCAAAGGTGTTTGCATCGTGACAGGTTTGGACTTGGATGACGCGC
CACTGAAATTACTAGCAGCTGAACTTAAGAAAGTCTGCGGCTGTGGTGGCTCTGTAAAAGATGGCAACATCGAAATCCAA
GGTGATGCTCGTGACAAGATCAAAGCACATCTTGAAAAGAAAGGCATGACAGTAAAATTAGCCGGTGGTTAA

Upstream 100 bases:

>100_bases
TTGATAAAAGGTGCCAAACCTGCCATTCAACGCCATATCGAAGCGTATTTGGTTGCAAAACAAAAAGCGCTACAAGCACA
ACAACAAAAGAAATAAGAAT

Downstream 100 bases:

>100_bases
TTCAAACTGAGCAAAAGATTTTAAAGAGCGTCGACTATGACGCTCTTTTTGTATCTGCAGTTTGGACAAGTTTGTAGAAC
TTAACTCAGATAAACATCGG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTLVYSTKTGRIKPEEEKVERPKGDGIVRIQRQTKGRKGKGVCIVTGLDLDDAPLKLLAAELKKVCGCGGSVKDGNIEIQ
GDARDKIKAHLEKKGMTVKLAGG

Sequences:

>Translated_103_residues
MTLVYSTKTGRIKPEEEKVERPKGDGIVRIQRQTKGRKGKGVCIVTGLDLDDAPLKLLAAELKKVCGCGGSVKDGNIEIQ
GDARDKIKAHLEKKGMTVKLAGG
>Mature_102_residues
TLVYSTKTGRIKPEEEKVERPKGDGIVRIQRQTKGRKGKGVCIVTGLDLDDAPLKLLAAELKKVCGCGGSVKDGNIEIQG
DARDKIKAHLEKKGMTVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=101, Percent_Identity=73.2673267326733, Blast_Score=141, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11044; Mature: 10913

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVYSTKTGRIKPEEEKVERPKGDGIVRIQRQTKGRKGKGVCIVTGLDLDDAPLKLLAA
CEEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHH
ELKKVCGCGGSVKDGNIEIQGDARDKIKAHLEKKGMTVKLAGG
HHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
TLVYSTKTGRIKPEEEKVERPKGDGIVRIQRQTKGRKGKGVCIVTGLDLDDAPLKLLAA
EEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHH
ELKKVCGCGGSVKDGNIEIQGDARDKIKAHLEKKGMTVKLAGG
HHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]