Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976987

Identifier: 156976987

GI number: 156976987

Start: 963408

End: 964505

Strand: Reverse

Name: 156976987

Synonym: VIBHAR_05772

Alternate gene names: NA

Gene position: 964505-963408 (Counterclockwise)

Preceding gene: 156976990

Following gene: 156976986

Centisome position: 43.76

GC content: 46.54

Gene sequence:

>1098_bases
ATGGATGCTTGCCAATTCAAACAGTCAACGGGGGACGAAAGACGCCTTCAGTGGCTGGCTTATGTTTACGGCGAACAAGT
CACGGGGGCTTGTTATGGTGACTTTGGCGCGACTCGTTGCGAACTCTCTCGTATTCCAAACGACAGCACCCTTTGCACTG
ATGTTTCTTCTGGCGAGTTTACGCAAAACACCTTATGTCACGGTAACTTCCAATTCACAGGAAACCAGTGTGATGGCGGT
ACTTTATTCTGGGGAACAAACGGCCCTGATGAGCCGATTATCCCAACGGATCCAACCCATGACCCCGATGACCCAACAGG
CCCTATAGAAGATCCTAGTGTCTTGCCTGATGACTCGACCAATACATTCAACAAACCTGACGTAGAAGATGAGCCGGATG
TGGAAGAACCCGACACAGATGAATCGACAGACACGGCAGTTGTGAGCGCCATTACAGGACTTAATAAAGATATTAACACT
GCCCTTCATGATTTGAATTCAGACATCAATGAAACTCAAGGCGCTATCGTTAATGAGTTGATTGCAGTCAAAGGCTCGCT
TGTCGATAACACGCAAGCGACACAAGAACAGCAAATCAATGACAACAAGATATACAACAACACCAAAGCGCTTATCCAAC
AAGCCAATGGCGACATTACAACAGCGGTCAATAAGAGCACCAATGCAACTAAGGGTGTCCGTGAAGACTTACAAGGATTA
GGTGATTCGATTGGCGAATTGGGTAATAGCCTTGATGGTATCGAAGAACTGCTTAAAGGCTCTGGTTTCAATTCCCCTTA
CGGTGATGATGTGCCTGAGCAAATCTTCGCCTCGTCTGATTTCATCGCTATCAATGAAACCATCGCAGAGAAAACCCGCT
CAATTGAAGACTACGTTGATGAAATCAAAGGTCTGGTTTCTATCGGTACCAACTTCAATAACGGCTCGTTAAGCGATCGG
TCTTTCACCGTTAAAGGCACCAAGGTTGATTCTGGCCTACAGCGTTTTGATGAGGTTTCGCCTTACGTTCGCCCTGTCAT
CCTCTTTATCTGCGCGCTCATTGCGCTCTACATCTTGTTTGGTCAACGGAGTAAATAA

Upstream 100 bases:

>100_bases
TTATTCAGAGGTTCGTTGCCCTGCAAACAGTGAATTCGACCCTTCAACATTGAGGTGTAAATCTCAATGCGAATACGGCG
CAAATCCAGACGGTTCATGT

Downstream 100 bases:

>100_bases
CGTGGATTTCATTTATTCAGCGCTCAATTTTATCGCCAACGTCGGCCAAACCATGGTCGAGTTCATCCAGTACATACCGG
ATTGGATCATCAATTGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Repressor RstR; Bacteriophage

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MDACQFKQSTGDERRLQWLAYVYGEQVTGACYGDFGATRCELSRIPNDSTLCTDVSSGEFTQNTLCHGNFQFTGNQCDGG
TLFWGTNGPDEPIIPTDPTHDPDDPTGPIEDPSVLPDDSTNTFNKPDVEDEPDVEEPDTDESTDTAVVSAITGLNKDINT
ALHDLNSDINETQGAIVNELIAVKGSLVDNTQATQEQQINDNKIYNNTKALIQQANGDITTAVNKSTNATKGVREDLQGL
GDSIGELGNSLDGIEELLKGSGFNSPYGDDVPEQIFASSDFIAINETIAEKTRSIEDYVDEIKGLVSIGTNFNNGSLSDR
SFTVKGTKVDSGLQRFDEVSPYVRPVILFICALIALYILFGQRSK

Sequences:

>Translated_365_residues
MDACQFKQSTGDERRLQWLAYVYGEQVTGACYGDFGATRCELSRIPNDSTLCTDVSSGEFTQNTLCHGNFQFTGNQCDGG
TLFWGTNGPDEPIIPTDPTHDPDDPTGPIEDPSVLPDDSTNTFNKPDVEDEPDVEEPDTDESTDTAVVSAITGLNKDINT
ALHDLNSDINETQGAIVNELIAVKGSLVDNTQATQEQQINDNKIYNNTKALIQQANGDITTAVNKSTNATKGVREDLQGL
GDSIGELGNSLDGIEELLKGSGFNSPYGDDVPEQIFASSDFIAINETIAEKTRSIEDYVDEIKGLVSIGTNFNNGSLSDR
SFTVKGTKVDSGLQRFDEVSPYVRPVILFICALIALYILFGQRSK
>Mature_365_residues
MDACQFKQSTGDERRLQWLAYVYGEQVTGACYGDFGATRCELSRIPNDSTLCTDVSSGEFTQNTLCHGNFQFTGNQCDGG
TLFWGTNGPDEPIIPTDPTHDPDDPTGPIEDPSVLPDDSTNTFNKPDVEDEPDVEEPDTDESTDTAVVSAITGLNKDINT
ALHDLNSDINETQGAIVNELIAVKGSLVDNTQATQEQQINDNKIYNNTKALIQQANGDITTAVNKSTNATKGVREDLQGL
GDSIGELGNSLDGIEELLKGSGFNSPYGDDVPEQIFASSDFIAINETIAEKTRSIEDYVDEIKGLVSIGTNFNNGSLSDR
SFTVKGTKVDSGLQRFDEVSPYVRPVILFICALIALYILFGQRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39548; Mature: 39548

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDACQFKQSTGDERRLQWLAYVYGEQVTGACYGDFGATRCELSRIPNDSTLCTDVSSGEF
CCCHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHCCCCCCCEEEECCCCCC
TQNTLCHGNFQFTGNQCDGGTLFWGTNGPDEPIIPTDPTHDPDDPTGPIEDPSVLPDDST
CCCCEECCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTFNKPDVEDEPDVEEPDTDESTDTAVVSAITGLNKDINTALHDLNSDINETQGAIVNEL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
IAVKGSLVDNTQATQEQQINDNKIYNNTKALIQQANGDITTAVNKSTNATKGVREDLQGL
HHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
GDSIGELGNSLDGIEELLKGSGFNSPYGDDVPEQIFASSDFIAINETIAEKTRSIEDYVD
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
EIKGLVSIGTNFNNGSLSDRSFTVKGTKVDSGLQRFDEVSPYVRPVILFICALIALYILF
HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GQRSK
CCCCC
>Mature Secondary Structure
MDACQFKQSTGDERRLQWLAYVYGEQVTGACYGDFGATRCELSRIPNDSTLCTDVSSGEF
CCCHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHCCCCCCCEEEECCCCCC
TQNTLCHGNFQFTGNQCDGGTLFWGTNGPDEPIIPTDPTHDPDDPTGPIEDPSVLPDDST
CCCCEECCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTFNKPDVEDEPDVEEPDTDESTDTAVVSAITGLNKDINTALHDLNSDINETQGAIVNEL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
IAVKGSLVDNTQATQEQQINDNKIYNNTKALIQQANGDITTAVNKSTNATKGVREDLQGL
HHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
GDSIGELGNSLDGIEELLKGSGFNSPYGDDVPEQIFASSDFIAINETIAEKTRSIEDYVD
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
EIKGLVSIGTNFNNGSLSDRSFTVKGTKVDSGLQRFDEVSPYVRPVILFICALIALYILF
HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GQRSK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA