| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976983
Identifier: 156976983
GI number: 156976983
Start: 960586
End: 960909
Strand: Reverse
Name: 156976983
Synonym: VIBHAR_05768
Alternate gene names: NA
Gene position: 960909-960586 (Counterclockwise)
Preceding gene: 156976984
Following gene: 156976982
Centisome position: 43.6
GC content: 36.11
Gene sequence:
>324_bases ATGGGTAAATCTGATCGAGAAATCATTGCCATTTTAAAAGATGTATTCCAATTAAATTTCGTGAAACCGATGAAGTCAGA TCATAACTTAAGAATATGGATGATTCGCATGACTTTTGCAGTATCGGTGCTTGGACTTTTGGGGCACGGATTCTTAGCCC TAACTGGACACGAGATTACCCAAAGTTTTTCCTCAATGGTTAATACTCCAATTGCATTTTTTTTCACGCTGTTGTTCTTA CATATTAACAACGAAATCGAAGATACAAGCATCATTATGTTTGTACTTACTTGGCTGTCATTAATGTTAGCTTTGTACGT GTAG
Upstream 100 bases:
>100_bases AAGTTTATCTATTGAGATGAGTGCCATAAAACGGCACAATGTACGGACAAAATAAGGCTAAAAGCCGTATAACAAGCGTT AGGTGAAAAAGAGGAACTAA
Downstream 100 bases:
>100_bases GAAGAATTTCACCTAAAAAACTGTTCAATAGGGTGTTATGTGCCTATTGCATTCACAAATCAACGATTTTTATAAATTTT AGGTTGGGTAAATCAGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGKSDREIIAILKDVFQLNFVKPMKSDHNLRIWMIRMTFAVSVLGLLGHGFLALTGHEITQSFSSMVNTPIAFFFTLLFL HINNEIEDTSIIMFVLTWLSLMLALYV
Sequences:
>Translated_107_residues MGKSDREIIAILKDVFQLNFVKPMKSDHNLRIWMIRMTFAVSVLGLLGHGFLALTGHEITQSFSSMVNTPIAFFFTLLFL HINNEIEDTSIIMFVLTWLSLMLALYV >Mature_106_residues GKSDREIIAILKDVFQLNFVKPMKSDHNLRIWMIRMTFAVSVLGLLGHGFLALTGHEITQSFSSMVNTPIAFFFTLLFLH INNEIEDTSIIMFVLTWLSLMLALYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12266; Mature: 12135
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSDREIIAILKDVFQLNFVKPMKSDHNLRIWMIRMTFAVSVLGLLGHGFLALTGHEIT CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHEEHHHHHH QSFSSMVNTPIAFFFTLLFLHINNEIEDTSIIMFVLTWLSLMLALYV HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GKSDREIIAILKDVFQLNFVKPMKSDHNLRIWMIRMTFAVSVLGLLGHGFLALTGHEIT CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHEEHHHHHH QSFSSMVNTPIAFFFTLLFLHINNEIEDTSIIMFVLTWLSLMLALYV HHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA