Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976974

Identifier: 156976974

GI number: 156976974

Start: 955703

End: 956068

Strand: Direct

Name: 156976974

Synonym: VIBHAR_05759

Alternate gene names: NA

Gene position: 955703-956068 (Clockwise)

Preceding gene: 156976972

Following gene: 156976975

Centisome position: 43.36

GC content: 43.44

Gene sequence:

>366_bases
ATGAAGCATCACGAAATGACAAAAAACTATATTTTTCGTGAATTTGAATGTGGTTTAAGTGTTGAGGAAGCAGCTGAACT
TTGTTTAAAAAGTGTGAGGACGGTCAAACAGTGGGATAAGGGAAAAGCCATTCCCCCAGAGTGTAGACGGCTGATGCGCA
TGAACAAGGGCAGGGAACTTAGCATCTGCGATGAGTGGGAAAACTTCATAATGAGGCATGATCGCCTAGAGCTTCCAACT
GGCCAGCGGGTTACGGCTCAACAAGTGTTAATTGGCGTAGCATTGTTAGAGTTAGGCGCTTCAAATGATATGGCAATTGC
TCACCAAATACTGAAGTATGCGAGAGTGTTGAAGAATATGGTGTAA

Upstream 100 bases:

>100_bases
AACAATCAATCCTCAATTCAGTGCGCATTATGGGCCCTTATGTTTAATGCAGTTGCATATAACTTATTTATAAAATGTCC
CACTTTTGAGGGACAGTTCA

Downstream 100 bases:

>100_bases
TAAAAAAGGCTCCGAGTGGAGCCCGTTTATATTTCATATTCGCTTACTGTATGTACTGTCGCGTAATTTCTGTTGTCACA
TACCAGAGACAAGCTCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKHHEMTKNYIFREFECGLSVEEAAELCLKSVRTVKQWDKGKAIPPECRRLMRMNKGRELSICDEWENFIMRHDRLELPT
GQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNMV

Sequences:

>Translated_121_residues
MKHHEMTKNYIFREFECGLSVEEAAELCLKSVRTVKQWDKGKAIPPECRRLMRMNKGRELSICDEWENFIMRHDRLELPT
GQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNMV
>Mature_121_residues
MKHHEMTKNYIFREFECGLSVEEAAELCLKSVRTVKQWDKGKAIPPECRRLMRMNKGRELSICDEWENFIMRHDRLELPT
GQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14057; Mature: 14057

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHHEMTKNYIFREFECGLSVEEAAELCLKSVRTVKQWDKGKAIPPECRRLMRMNKGREL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
SICDEWENFIMRHDRLELPTGQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNM
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure
MKHHEMTKNYIFREFECGLSVEEAAELCLKSVRTVKQWDKGKAIPPECRRLMRMNKGREL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
SICDEWENFIMRHDRLELPTGQRVTAQQVLIGVALLELGASNDMAIAHQILKYARVLKNM
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA