| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is modB [H]
Identifier: 156976941
GI number: 156976941
Start: 928639
End: 929328
Strand: Direct
Name: modB [H]
Synonym: VIBHAR_05726
Alternate gene names: 156976941
Gene position: 928639-929328 (Clockwise)
Preceding gene: 156976940
Following gene: 156976942
Centisome position: 42.13
GC content: 46.38
Gene sequence:
>690_bases GTGACAGAACTTGAATACCAAGCCTTAATACTAAGCGTAAAAGTCGGCGCCTATGCCGTTGTTTGGTTAATACCACTCGG CATTGCTCTGGCTTGGTTACTTTCTCGAAAACAGTTTATCGGTAAATCTATTCTCGACAGTCTGATCCATTTACCATTGG TATTGCCGCCTGTGGTGATTGGTTATCTATTGCTGATCTCATTAGGCCGGCAGGGGGTTCTTGGCAGTTGGCTTTATGAA CACTTTGGTTTGGTGTTCAGCTTCAACTGGAAGGGGGCGGTTATCGCTTGTATCGTTGTTGCGCTGCCTTTGATGGTGCG TTCCGTTCGCCTTAGCTTAGATAATGTTGATCCTAAACTAGAACACGCAGCTTCAACGTTAGGCGCATCACCTTTAAAGG TATTCGTTACTATCACGCTGCCTTTAACGATCCCAGGCATTATCACTGGCACTATGCTTTCTTTCGCTCGCAGCTTGGGC GAGTTTGGAGCAACGATCAGTTTTGTTTCTAACATTCCCGGCGAGACCCAAACTATTCCATTGGCGATGTACAATTTCAT CGAAACGCCTGGAGCAGAGATGGAAGCCGCGCGCTTGTGCATCATCTCCATTACTTTGGCTCTCTCGACATTAATGATAT CAGAGTGGTTAAATCGCAAAGCTTCAGCGCGTTTAGGAGCTAAACGATGA
Upstream 100 bases:
>100_bases AAAAGACTCAACGCAATCTAAGCAGTTTTTTGAATACTTGAAATCCGACGATGCCAAACAAGTATTTGTGCAATACGGAT TTCAATAAAAAGGGCACAGA
Downstream 100 bases:
>100_bases GCATAGAAATCCAATTTAAACAATCACTTGGTGAAACTGATTTTGATATCAATCTATCGTTACCGGGTAACGGAATAAGT GCGTTGTTTGGCCGTTCAGG
Product: molybdate ABC transporter permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTELEYQALILSVKVGAYAVVWLIPLGIALAWLLSRKQFIGKSILDSLIHLPLVLPPVVIGYLLLISLGRQGVLGSWLYE HFGLVFSFNWKGAVIACIVVALPLMVRSVRLSLDNVDPKLEHAASTLGASPLKVFVTITLPLTIPGIITGTMLSFARSLG EFGATISFVSNIPGETQTIPLAMYNFIETPGAEMEAARLCIISITLALSTLMISEWLNRKASARLGAKR
Sequences:
>Translated_229_residues MTELEYQALILSVKVGAYAVVWLIPLGIALAWLLSRKQFIGKSILDSLIHLPLVLPPVVIGYLLLISLGRQGVLGSWLYE HFGLVFSFNWKGAVIACIVVALPLMVRSVRLSLDNVDPKLEHAASTLGASPLKVFVTITLPLTIPGIITGTMLSFARSLG EFGATISFVSNIPGETQTIPLAMYNFIETPGAEMEAARLCIISITLALSTLMISEWLNRKASARLGAKR >Mature_228_residues TELEYQALILSVKVGAYAVVWLIPLGIALAWLLSRKQFIGKSILDSLIHLPLVLPPVVIGYLLLISLGRQGVLGSWLYEH FGLVFSFNWKGAVIACIVVALPLMVRSVRLSLDNVDPKLEHAASTLGASPLKVFVTITLPLTIPGIITGTMLSFARSLGE FGATISFVSNIPGETQTIPLAMYNFIETPGAEMEAARLCIISITLALSTLMISEWLNRKASARLGAKR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=226, Percent_Identity=63.2743362831858, Blast_Score=265, Evalue=2e-72, Organism=Escherichia coli, GI1788764, Length=159, Percent_Identity=37.1069182389937, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI87082099, Length=225, Percent_Identity=34.6666666666667, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1787369, Length=233, Percent_Identity=26.6094420600858, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787713, Length=157, Percent_Identity=28.0254777070064, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787081, Length=151, Percent_Identity=35.7615894039735, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787080, Length=164, Percent_Identity=33.5365853658537, Blast_Score=60, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24816; Mature: 24685
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELEYQALILSVKVGAYAVVWLIPLGIALAWLLSRKQFIGKSILDSLIHLPLVLPPVVI CCCCHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYLLLISLGRQGVLGSWLYEHFGLVFSFNWKGAVIACIVVALPLMVRSVRLSLDNVDPKL HHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EHAASTLGASPLKVFVTITLPLTIPGIITGTMLSFARSLGEFGATISFVSNIPGETQTIP HHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LAMYNFIETPGAEMEAARLCIISITLALSTLMISEWLNRKASARLGAKR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC >Mature Secondary Structure TELEYQALILSVKVGAYAVVWLIPLGIALAWLLSRKQFIGKSILDSLIHLPLVLPPVVI CCCHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYLLLISLGRQGVLGSWLYEHFGLVFSFNWKGAVIACIVVALPLMVRSVRLSLDNVDPKL HHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EHAASTLGASPLKVFVTITLPLTIPGIITGTMLSFARSLGEFGATISFVSNIPGETQTIP HHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LAMYNFIETPGAEMEAARLCIISITLALSTLMISEWLNRKASARLGAKR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]