| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976895
Identifier: 156976895
GI number: 156976895
Start: 883261
End: 883725
Strand: Direct
Name: 156976895
Synonym: VIBHAR_05673
Alternate gene names: NA
Gene position: 883261-883725 (Clockwise)
Preceding gene: 156976894
Following gene: 156976896
Centisome position: 40.08
GC content: 35.27
Gene sequence:
>465_bases ATGACTAACGAACAAAAAATAATAGATAACCTGCTTCAAGAGCTCGGTAGAACATGGCTTTTAGGCTTTTTAAAGCTTGA TGATTCTGGGCGATGTGCTTTTAAAACAGAAGCAGGGGTTGATGTGGCTATTGATATGATAGCCTGTAGTTCGCACTTAC AACTTCTTGCTGATTTAGGCTCCATACCAGATAACGAAGATAATCACTTTTTGATTCGATTACTTCATCATAATTTTAAC AGTTCTATCTTACGTCAGGCATATTTTGCTCTAGATCCTAAAGATAATCGGGTCTTACTCCGTTATCAGCACCCGGTAGA AGGGTTAGATGTAAATATTCTCGCTAATATTATCGGAAATTTTACGACGATATTACATGAAGCAAAAAATACCATTGGTG AATCATTTGAATTAACGAATGATTCACCTTTTAAAATTGACAATAACAACTTCATCAGAGGTTAA
Upstream 100 bases:
>100_bases GCTGATATTTTCAATTAACTCAATTAATTTAATTCAACAAAGCACTCTTTAATAGGGTATTTTTTAAGATTGTCTTGAGT ATATAATTTAAATAACCTTT
Downstream 100 bases:
>100_bases CTGATACCATGCCAGAAATTACAGCTAGACCTATTGACCCGAATTTAACCGCCAGTATATCTCCATCGTCCTCTAGTAAT GAGCCAAGTGTCAAAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTNEQKIIDNLLQELGRTWLLGFLKLDDSGRCAFKTEAGVDVAIDMIACSSHLQLLADLGSIPDNEDNHFLIRLLHHNFN SSILRQAYFALDPKDNRVLLRYQHPVEGLDVNILANIIGNFTTILHEAKNTIGESFELTNDSPFKIDNNNFIRG
Sequences:
>Translated_154_residues MTNEQKIIDNLLQELGRTWLLGFLKLDDSGRCAFKTEAGVDVAIDMIACSSHLQLLADLGSIPDNEDNHFLIRLLHHNFN SSILRQAYFALDPKDNRVLLRYQHPVEGLDVNILANIIGNFTTILHEAKNTIGESFELTNDSPFKIDNNNFIRG >Mature_153_residues TNEQKIIDNLLQELGRTWLLGFLKLDDSGRCAFKTEAGVDVAIDMIACSSHLQLLADLGSIPDNEDNHFLIRLLHHNFNS SILRQAYFALDPKDNRVLLRYQHPVEGLDVNILANIIGNFTTILHEAKNTIGESFELTNDSPFKIDNNNFIRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17406; Mature: 17275
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEQKIIDNLLQELGRTWLLGFLKLDDSGRCAFKTEAGVDVAIDMIACSSHLQLLADLG CCCHHHHHHHHHHHHHHHHEEHEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHC SIPDNEDNHFLIRLLHHNFNSSILRQAYFALDPKDNRVLLRYQHPVEGLDVNILANIIGN CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH FTTILHEAKNTIGESFELTNDSPFKIDNNNFIRG HHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCC >Mature Secondary Structure TNEQKIIDNLLQELGRTWLLGFLKLDDSGRCAFKTEAGVDVAIDMIACSSHLQLLADLG CCHHHHHHHHHHHHHHHHEEHEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHC SIPDNEDNHFLIRLLHHNFNSSILRQAYFALDPKDNRVLLRYQHPVEGLDVNILANIIGN CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH FTTILHEAKNTIGESFELTNDSPFKIDNNNFIRG HHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA