| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976862
Identifier: 156976862
GI number: 156976862
Start: 849803
End: 850078
Strand: Direct
Name: 156976862
Synonym: VIBHAR_05638
Alternate gene names: NA
Gene position: 849803-850078 (Clockwise)
Preceding gene: 156976860
Following gene: 156976865
Centisome position: 38.56
GC content: 43.12
Gene sequence:
>276_bases ATGAGCCAAAACGATATTCAAGCCAAGATTGCCAGCTTTACTTGTATCGAAGAAGCTTTGGATTACTTCGATATTGGTTT TGATAGCCGCTTTATTGATAAACACAGAGTGGAGTTAGTGAAGCGCTTCAATGGCTATTTGATTCTGACTAAGCCTGAAG ATTGGTTTTCGGCTCGCCGTGCATTAAAGAACACATACTGCAAGGTGCAACGTAGTTTACTGGATACAACTACACGCTCA GCTTGTCGTGGTTGCACTTCTTGTCAGCGTCGCTAG
Upstream 100 bases:
>100_bases CTGTTTCTAGCAAAATGACGTGCTACGGATGTAAATCAAAGATCAGTTGAACGAAACTTCTTATACTCTAAGTTAAGTAA ATAAACTCAGAAACGAGGCT
Downstream 100 bases:
>100_bases TACTCTCTTCAACAGCGAACAATAATGTCAGTCAGCTCTGAGCGCTAAAAAACAAACCCCGCAGATGTACTCAAGCGCAT CTGCGGGGGTTTTTGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSQNDIQAKIASFTCIEEALDYFDIGFDSRFIDKHRVELVKRFNGYLILTKPEDWFSARRALKNTYCKVQRSLLDTTTRS ACRGCTSCQRR
Sequences:
>Translated_91_residues MSQNDIQAKIASFTCIEEALDYFDIGFDSRFIDKHRVELVKRFNGYLILTKPEDWFSARRALKNTYCKVQRSLLDTTTRS ACRGCTSCQRR >Mature_90_residues SQNDIQAKIASFTCIEEALDYFDIGFDSRFIDKHRVELVKRFNGYLILTKPEDWFSARRALKNTYCKVQRSLLDTTTRSA CRGCTSCQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10649; Mature: 10518
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNDIQAKIASFTCIEEALDYFDIGFDSRFIDKHRVELVKRFNGYLILTKPEDWFSARR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH ALKNTYCKVQRSLLDTTTRSACRGCTSCQRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQNDIQAKIASFTCIEEALDYFDIGFDSRFIDKHRVELVKRFNGYLILTKPEDWFSARR CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH ALKNTYCKVQRSLLDTTTRSACRGCTSCQRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA