| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is insG [H]
Identifier: 156976852
GI number: 156976852
Start: 841036
End: 842406
Strand: Direct
Name: insG [H]
Synonym: VIBHAR_05628
Alternate gene names: 156976852
Gene position: 841036-842406 (Clockwise)
Preceding gene: 156976848
Following gene: 156976855
Centisome position: 38.16
GC content: 43.4
Gene sequence:
>1371_bases GTGTCGTTTTCCCATTTCAAATCTCCTCATGGTTGGAGACTTGATCTTATTCTTCGCGCTAGGCGATTAGAATGCGGGTT TTATGGAGCGCTTACAGTTGAAACACTCGCTGACCTCCTGCCCATTGAACTCATTAATAGTGCTTACGAACTTACTGATA CTGTTACGCTAAGAAAACGAAAGCTAACTTTAGAGTCGATGGCATGGTTACTGGTTGGAATGGCAATCTATAACGATAAA TCCATGGCTGACATTGTAAATATGCTCGATATTGTTGACCGCACAGGTAAACCATTTGTTGCTCCAAGTGCATTAACACA GCGAAGAAAAAACCTTGGTGAGTCAGCGGCTAAAGCTCTTTTTGAGTGTACCCAGAGTCATTGGTTTAAACAGGCTAATT TACCAAACTGGAACGGACTCACTCTTCTTGGCGTTGATGGTGTCTTGTGGCGAACTGAGGATTCAAAAGAGAACGCTGCA ACGTTTGCAAAGCCTACCAATCGTGACGGAAAAGAAACACAGTACCCACAAGTACGCATGGTATGTCAGATGGAATTGAG CAGCCATTTAATCACAGGCAGTGCCTTTGACTGTTATAGCGTCAATGAAATGAAGTTAGCAGAGCAACTGATAGAGACGA CACCTGATAATAGTTTAACCCTTTTTGATAAAGGCTTTTACTCCCTTGGCCTACTTCAAGCATGGAGCTCGCAAGGCATA AATCGACATTGGCTTATCCCAATGAAAAAAGGACTTACTTATGACGTCGTTCAGTCTCTTGGCCGCCAAGATAAACTGAT AAAGCTGAAGAGTAATCCGCAAGCACGTAAAAAGTGGCCAGAGCTAGAACAAGAAGTGGTTGTACGTTTAATCACGAGAG TCAAAGATGGCAAGCAATACGATGTTCTCACCTCAATGCTTGACCCTATGCTCTACCCAAAGTCAGATATCGTAGGCTTA TATGGGTATCGTTGGGAAATTGAACTCGGATACCGTGAGCAAAAACAGTACATGCTTGGTAACCGACTCACGCTTCGAAG TCGACTCCCTGAATTAGTGAAGCAAGAACTCTGGGGAATACTACTGACCTATAACTTGATCAGGTATCAAATGGTGCAGA TGTGTAATACGTTGAATGGTGATTACTTGCCATATCAACTTAGCTTCAATGGAGCACTAGCTCACATCATGCGCCTGATA GTGGGACTTCCATACTCGTCACCAGGAGCAATCCCGAGGCAACTCGAAAACTTCTACTCAATGAGTGAGAGCTTAATACT TGAACCTAGGAGAGAAAGATCCTTCCCTAGAGTCGTTAAGAAAAAGCCAAGCCGATACCCTAGAAAAAACAATGCCGATC ACCTTAAGTGA
Upstream 100 bases:
>100_bases AAAACGTCGAGGGATTGAGTTCATTAAGCTTACAAAATGCAAGCGTTGACAATGAACTCGATTCAGACTGCTCGATGAGC GTTTGCCATTCTTGATTAGT
Downstream 100 bases:
>100_bases ACGGCATTAGAGTGATGCTCTGGCTTTATTGTTTTTCGATCAAACGAAACGTAAGTAGAAGGGGGATTTCTATCGTTTTA TAAACGGCAACTTGAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSFSHFKSPHGWRLDLILRARRLECGFYGALTVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMAIYNDK SMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAA TFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGI NRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKSDIVGL YGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLI VGLPYSSPGAIPRQLENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK
Sequences:
>Translated_456_residues MSFSHFKSPHGWRLDLILRARRLECGFYGALTVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMAIYNDK SMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAA TFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGI NRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKSDIVGL YGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLI VGLPYSSPGAIPRQLENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK >Mature_455_residues SFSHFKSPHGWRLDLILRARRLECGFYGALTVETLADLLPIELINSAYELTDTVTLRKRKLTLESMAWLLVGMAIYNDKS MADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAAT FAKPTNRDGKETQYPQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGIN RHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLDPMLYPKSDIVGLY GYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLIV GLPYSSPGAIPRQLENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=413, Percent_Identity=52.5423728813559, Blast_Score=433, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 52517; Mature: 52385
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSHFKSPHGWRLDLILRARRLECGFYGALTVETLADLLPIELINSAYELTDTVTLRKR CCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLTLESMAWLLVGMAIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKAL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQYPQVRM HHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHH VCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGI HHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC NRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQY CCEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCCHH DVLTSMLDPMLYPKSDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGI HHHHHHHHHCCCCCCCEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQLENFYS HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH MSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK HHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SFSHFKSPHGWRLDLILRARRLECGFYGALTVETLADLLPIELINSAYELTDTVTLRKR CCCCCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLTLESMAWLLVGMAIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKAL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FECTQSHWFKQANLPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQYPQVRM HHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHH VCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGI HHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC NRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQY CCEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCCHH DVLTSMLDPMLYPKSDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGI HHHHHHHHHCCCCCCCEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQLENFYS HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH MSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK HHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]