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The map label for this gene is 156976830

Identifier: 156976830

GI number: 156976830

Start: 808283

End: 809326

Strand: Reverse

Name: 156976830

Synonym: VIBHAR_05606

Alternate gene names: NA

Gene position: 809326-808283 (Counterclockwise)

Preceding gene: 156976832

Following gene: 156976829

Centisome position: 36.72

GC content: 42.91

Gene sequence:

>1044_bases
ATGCTACGCATCATGAAAATTACACTGACTCCTCAACAGAAACTACAACTCGAACAAACACACGATTCGACTCGTGATGG
TCGAGTGCGTGATCGCATTAAAGCAGTGTTGCTTGCTTCTGAAGGTTGGAGTCAGACCATGATTGCTCAAGCTCTTCGTA
TCCATGAATCGACTGTTGCACGCCATCTCAGCGACTACGTTCTGTCTGAAAAACTGAAGCCTGAAAATGGTGGAAGTCAA
AGCAAGCTTTCTGCCACTCAAACCATGCAGTTAATCGAGCATTTGACTGAGAAAACCTATTCCCACACCCATCAAATTGT
CACCTACGTTAAAGAGACATTTGGACTTGATTACACGGTCTCAGGAATGAACAAATGGCTTCACCACAATGGTTTTAGCT
ACAAGCAACCGAAAGGCGTTCCACACAAATTTGATGAAGCAAAACAGCAAGCTTTCATCGAGGCTTATGAAGCGCTAAAG
GCAAGCTGTGGCGAGGATGAATCGATAGTCTTTATTGGTGCAGTTCACCCAACATTATCAACAAAAATATCTCATGGCTG
GATACGAACTGGTCAGGATAAAGTGATTGAAACAACAGGTAATCGTAGCCGATTGAACATTATTGGTGCGCTGAACCTAT
CGGATATCGGTGCAACCATTGTTCACGACTATGAGAACATTAACAGTGAAACGATTGTTCGCTTTTTCTGTAAGTTAAGA
GAGAGTTATCCGTTAACCCATAAGCTTCATATCATCTTAGATGGTGCGGGGTATCACCGCAGTGACTTAGTCAAAGATGC
GGCGTTTGTCCTGAATATTGAACTGCATTATCTTCCACCTTACAGCCCAAACCTCAACCCAATAGAGCGGCTATGGAAAG
TAATGAATGAGAAGTCGAGGAACAACGTTTACTTCAAAAGAAAACGGGACTTCAAGGAGGCAATAGACCAATTTTTTGCA
GTGACTCTTCCAGAGAGCGCAGGCTCTTTGGCATCTCGAATTAATGATAATTTTCAGATTCTCAAGCCTGCATCTTCAAG
TTGA

Upstream 100 bases:

>100_bases
AAGCTATTGAATTTAGCTGGAAAGGAAAGGTTTCAACGACATAAAAAGAGACTATACCCGTGATCATTGAAGTTGCTTGA
TTTTCAATAGAATCAGGATC

Downstream 100 bases:

>100_bases
TTCGGTATATAACAAGTTGGTCAAAAAAATAATAAAAACCCTATATAACAACAATTTAAATGATAAAGCTAAATAAAAAT
TATATTTAAAAAAATAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives-Like Protein; Transposase Family Protein; Integrase Catalytic Region; Transposase Related Protein; Transposase And Inactivated Derivatives; Family Transposase; Transposase IS; Transposase Of IS; TnpA-Like Protein; ISRin1 Transposase OrfB; Second ORF In Transposon ISC; Resolvase Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLRIMKITLTPQQKLQLEQTHDSTRDGRVRDRIKAVLLASEGWSQTMIAQALRIHESTVARHLSDYVLSEKLKPENGGSQ
SKLSATQTMQLIEHLTEKTYSHTHQIVTYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALK
ASCGEDESIVFIGAVHPTLSTKISHGWIRTGQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLR
ESYPLTHKLHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFA
VTLPESAGSLASRINDNFQILKPASSS

Sequences:

>Translated_347_residues
MLRIMKITLTPQQKLQLEQTHDSTRDGRVRDRIKAVLLASEGWSQTMIAQALRIHESTVARHLSDYVLSEKLKPENGGSQ
SKLSATQTMQLIEHLTEKTYSHTHQIVTYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALK
ASCGEDESIVFIGAVHPTLSTKISHGWIRTGQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLR
ESYPLTHKLHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFA
VTLPESAGSLASRINDNFQILKPASSS
>Mature_347_residues
MLRIMKITLTPQQKLQLEQTHDSTRDGRVRDRIKAVLLASEGWSQTMIAQALRIHESTVARHLSDYVLSEKLKPENGGSQ
SKLSATQTMQLIEHLTEKTYSHTHQIVTYVKETFGLDYTVSGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALK
ASCGEDESIVFIGAVHPTLSTKISHGWIRTGQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLR
ESYPLTHKLHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSRNNVYFKRKRDFKEAIDQFFA
VTLPESAGSLASRINDNFQILKPASSS

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39463; Mature: 39463

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIMKITLTPQQKLQLEQTHDSTRDGRVRDRIKAVLLASEGWSQTMIAQALRIHESTVA
CEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH
RHLSDYVLSEKLKPENGGSQSKLSATQTMQLIEHLTEKTYSHTHQIVTYVKETFGLDYTV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
SGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALKASCGEDESIVFIGAVHPTLS
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHH
TKISHGWIRTGQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLR
HHHCCCCEECCCCCEEEECCCCCEEEEEEECCHHHHCHHEEHHHHCCCHHHHHHHHHHHH
ESYPLTHKLHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSR
HCCCCEEEEEEEEECCCCCHHHHHHCEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCC
NNVYFKRKRDFKEAIDQFFAVTLPESAGSLASRINDNFQILKPASSS
CCEEEEHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MLRIMKITLTPQQKLQLEQTHDSTRDGRVRDRIKAVLLASEGWSQTMIAQALRIHESTVA
CEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH
RHLSDYVLSEKLKPENGGSQSKLSATQTMQLIEHLTEKTYSHTHQIVTYVKETFGLDYTV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
SGMNKWLHHNGFSYKQPKGVPHKFDEAKQQAFIEAYEALKASCGEDESIVFIGAVHPTLS
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHH
TKISHGWIRTGQDKVIETTGNRSRLNIIGALNLSDIGATIVHDYENINSETIVRFFCKLR
HHHCCCCEECCCCCEEEECCCCCEEEEEEECCHHHHCHHEEHHHHCCCHHHHHHHHHHHH
ESYPLTHKLHIILDGAGYHRSDLVKDAAFVLNIELHYLPPYSPNLNPIERLWKVMNEKSR
HCCCCEEEEEEEEECCCCCHHHHHHCEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCC
NNVYFKRKRDFKEAIDQFFAVTLPESAGSLASRINDNFQILKPASSS
CCEEEEHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA