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The map label for this gene is napA [C]

Identifier: 156976806

GI number: 156976806

Start: 785028

End: 787691

Strand: Direct

Name: napA [C]

Synonym: VIBHAR_05582

Alternate gene names: 156976806

Gene position: 785028-787691 (Clockwise)

Preceding gene: 156976805

Following gene: 156976807

Centisome position: 35.62

GC content: 47.67

Gene sequence:

>2664_bases
ATGTCGCAAGGATGCAAAAAAACCACTTGTCCCTATTGTGGTGTTGGATGTGGTGTCGAAGTCAATGCGAAAGGAATCGT
TGGGGATGCGTGTCATCCTGCAAATGCGGGATCACTGTGCGTAAAGGGTGTCGCGTTGGCAGAGAGTTTGAATATGCCCT
CGCGCTTGTTGTATCCAAAGCTTGTTACCAAGCTGCGACCTCAAGGGCAAGAAGTGCAATGGCAACAAGCCACGGATCTG
ATTGCAGAGAAGATTCATCAAGCGAAAGCGGAGTTTGGACCGGATTCCGTCGCGATGTACGTATCAGGCCAGTTGTTGAC
AGAAGACTATTACGTCGCCAACAAACTCATGAAAGGCTATGTTGGCAGCGCAAACATCGATACGAACTCCCGTTTGTGTA
TGTCTTCGGCGGTTGCGGCTCATGTACGAGCATTTGGCGAAGATGTCGTTCCCGTCAATTACGACGATATTGATAAGACT
GAGCTATTGATCATCTGCGGTGCGAATACCGCTTGGACGCATCCTGTTTTATTCCGACGTATTCAACAAGCGAGAGAAAA
CAATCCTAACCTCAAGCTGGTGGTCATTGACCCGCGTGAAACGGTCACCGCGCAACAAGCAGATTTGCATCTACCGATCA
AAAATGATGGAGACGTGTCGCTTTTCAATGGGCTGCTCAAGTTTCTTATCGAGCAGCAATGTATTGATTCTGAATATATA
CATTCCTATACCGACGGGTTTGATGCACTTACAGAAGAAGTTTCTGATTTGCGTTACGATGTCACTAATCTAACGTCTTC
CATTGGTATTTCAGAAGAAAAACTCACGACATTCTTCCAATGGTTCGCACAAAGCTCAACCGCAATCACGTTGTTTTGCC
AAGGGGTTAACCAAGCCGAAAATGGTGTCGATAAAGGCAATGCCATTATTAATGCACATTTGGCGTCAGGTAAAATTGCC
AAGTCAGGTTGTGGGCCGTTTTCTATTACAGGTCAGCCGAATGCGATGGGTGGACGAGAAGTAGGTGGATTGGCCAATCA
GTTAGCGGTTCATCGTGCTTTTGACGCAGAGTCTATCAAGCAAGTGCAGGCGTTTTGGGATTCCCCAGAAATTGCCACTC
AGCCCGGTTTAAAAGCCGTCGACCTGTTTGAGGCAGTAGAGCGTGGTGAGATCAAAGTTCTGTGGATCATGGCAACCAAT
CCGGTTGTCTCTTTACCAGATAACCAATTGGTAAAACGTGCACTAGAGGTTTGTCCGTTTGTGATTGTTTCAGATATCAC
TGCGGATTCGGATGTAGCGCATTACGCGGATCTGTTGTTGCCCGCCGCTGGTTGGGGGGAGAAACAAGGCATGGTGACCA
ACTCTGAGCGTCGACTTTCTAGGCAACGCCAGTTTCAAATGCCTCCGGGTGAAGCAAAATCAGATTGGTGGGCGATTAGC
CAAGTCGGACAAGCTCTGTGTGCATTGGAAAAGACACAAAATGGTTTTGCATTTACTTCTGAGCGGTCGGTATTCAGGGA
ATATACGGCGATGACAGGCATGAATGCCGATTCACCTTTGAAGCTCGACCTGTCTCAACACGCGAACTTAACCGAGCAAG
AATACGAAGAGTGGGTGCCGACACAATGGGGAGGAGAGCGCCCTTTTGAAGATGGCGTCTATTCGCACCCAGATGGAAAA
GCGCGTTTTGTCGTGACCAGTGAATCACCAACACGTTTAGAGAGAACAAAAGGCTGGTGGCTCAATACGGGCAGGCAACG
CGACCAATGGCATACCATGACGCGAACAGGGCATATCGCACACCTTGCCGCATCTGAGTTAGAACCAACCGTGTACATGA
ACACACTCTCCGCTACTCAAAGTTGCTTAAAAGTAGGGCAGCTCACCAAGCTGTTTCAGCCCACTTCAAACACCAGTATT
TATGCCAAAGTTGCCATTGATGAGGGGTTAGGTTTTCAGGAGCTGTTTATGTCCATGCACTGGGCGGGTCGATATGGCGG
TGAAAGCAGTGTTAACGCGATAGTAAACAGCGCAAAAGACCCTATCTCTGGGCAGCCTGCCTTTAAGTCGTCTTATGTTG
AAGTGCAAGACGCAGCGGTAAAAACCTACGGTATGTTTATCGGTACACAGTTTGATTCCGGCAAGTTTCTCTACAGCGCA
TTTCAAGCTGAGAGTAATCTGGGCATCTGGCGCTTTGCACACGATAAACGACCAAAGAAGCAGAGTTTTTGTCGAACGGA
AAAGAGCCGCAGAATTACGATAGATATTGCCCAAGGTTGGCTAGCGGTGGATTACGACCTTGTTGGAGACGTTCGTATCA
TTCGTTCTGTTTTATTGGTGTCTAGTGAACCGATTCAAACCGACTACACCAACTTTACCGGCTTGATTGGCAAGCCAATG
GAGCTATCGCAACTGCTTACCATCACTCAATCGCAAAGCAGTGCCAAACTGGTTTGTAGTTGTTTCCGTGTTACTGATAA
ACAAATACATGACGCGATGGAGAAGCAAGACTGCACTTCACTGACCCAACTGCAAAACAAACTCAAATGCGGTACTAACT
GTGGTTCGTGCGTCTCTCAAATCAAACAAATGGTCGACAGCCATCAGCATCAAAAGGTCAAACAGCAAGCGAGCCAGCAA
AGCCTGGCGATTCAAATAAAGTAA

Upstream 100 bases:

>100_bases
ACTTTTTTGAGCTTTTATAGGCAATGCAGCCTCTCTCGTTTCGGGAGAGGTTTTTTTTCGCTTGTAGCTCGTCATTCTAA
GGAAAGAATCAGGGGGCGGA

Downstream 100 bases:

>100_bases
GTCACAAAGAGGATAAGCATATGGAAGCGCCTTATCAAAAATCTTGGTTTAATAAGGGACAAACGAGTCAGGAACAAGAA
CGCTCGTCTCGTTTTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 887; Mature: 886

Protein sequence:

>887_residues
MSQGCKKTTCPYCGVGCGVEVNAKGIVGDACHPANAGSLCVKGVALAESLNMPSRLLYPKLVTKLRPQGQEVQWQQATDL
IAEKIHQAKAEFGPDSVAMYVSGQLLTEDYYVANKLMKGYVGSANIDTNSRLCMSSAVAAHVRAFGEDVVPVNYDDIDKT
ELLIICGANTAWTHPVLFRRIQQARENNPNLKLVVIDPRETVTAQQADLHLPIKNDGDVSLFNGLLKFLIEQQCIDSEYI
HSYTDGFDALTEEVSDLRYDVTNLTSSIGISEEKLTTFFQWFAQSSTAITLFCQGVNQAENGVDKGNAIINAHLASGKIA
KSGCGPFSITGQPNAMGGREVGGLANQLAVHRAFDAESIKQVQAFWDSPEIATQPGLKAVDLFEAVERGEIKVLWIMATN
PVVSLPDNQLVKRALEVCPFVIVSDITADSDVAHYADLLLPAAGWGEKQGMVTNSERRLSRQRQFQMPPGEAKSDWWAIS
QVGQALCALEKTQNGFAFTSERSVFREYTAMTGMNADSPLKLDLSQHANLTEQEYEEWVPTQWGGERPFEDGVYSHPDGK
ARFVVTSESPTRLERTKGWWLNTGRQRDQWHTMTRTGHIAHLAASELEPTVYMNTLSATQSCLKVGQLTKLFQPTSNTSI
YAKVAIDEGLGFQELFMSMHWAGRYGGESSVNAIVNSAKDPISGQPAFKSSYVEVQDAAVKTYGMFIGTQFDSGKFLYSA
FQAESNLGIWRFAHDKRPKKQSFCRTEKSRRITIDIAQGWLAVDYDLVGDVRIIRSVLLVSSEPIQTDYTNFTGLIGKPM
ELSQLLTITQSQSSAKLVCSCFRVTDKQIHDAMEKQDCTSLTQLQNKLKCGTNCGSCVSQIKQMVDSHQHQKVKQQASQQ
SLAIQIK

Sequences:

>Translated_887_residues
MSQGCKKTTCPYCGVGCGVEVNAKGIVGDACHPANAGSLCVKGVALAESLNMPSRLLYPKLVTKLRPQGQEVQWQQATDL
IAEKIHQAKAEFGPDSVAMYVSGQLLTEDYYVANKLMKGYVGSANIDTNSRLCMSSAVAAHVRAFGEDVVPVNYDDIDKT
ELLIICGANTAWTHPVLFRRIQQARENNPNLKLVVIDPRETVTAQQADLHLPIKNDGDVSLFNGLLKFLIEQQCIDSEYI
HSYTDGFDALTEEVSDLRYDVTNLTSSIGISEEKLTTFFQWFAQSSTAITLFCQGVNQAENGVDKGNAIINAHLASGKIA
KSGCGPFSITGQPNAMGGREVGGLANQLAVHRAFDAESIKQVQAFWDSPEIATQPGLKAVDLFEAVERGEIKVLWIMATN
PVVSLPDNQLVKRALEVCPFVIVSDITADSDVAHYADLLLPAAGWGEKQGMVTNSERRLSRQRQFQMPPGEAKSDWWAIS
QVGQALCALEKTQNGFAFTSERSVFREYTAMTGMNADSPLKLDLSQHANLTEQEYEEWVPTQWGGERPFEDGVYSHPDGK
ARFVVTSESPTRLERTKGWWLNTGRQRDQWHTMTRTGHIAHLAASELEPTVYMNTLSATQSCLKVGQLTKLFQPTSNTSI
YAKVAIDEGLGFQELFMSMHWAGRYGGESSVNAIVNSAKDPISGQPAFKSSYVEVQDAAVKTYGMFIGTQFDSGKFLYSA
FQAESNLGIWRFAHDKRPKKQSFCRTEKSRRITIDIAQGWLAVDYDLVGDVRIIRSVLLVSSEPIQTDYTNFTGLIGKPM
ELSQLLTITQSQSSAKLVCSCFRVTDKQIHDAMEKQDCTSLTQLQNKLKCGTNCGSCVSQIKQMVDSHQHQKVKQQASQQ
SLAIQIK
>Mature_886_residues
SQGCKKTTCPYCGVGCGVEVNAKGIVGDACHPANAGSLCVKGVALAESLNMPSRLLYPKLVTKLRPQGQEVQWQQATDLI
AEKIHQAKAEFGPDSVAMYVSGQLLTEDYYVANKLMKGYVGSANIDTNSRLCMSSAVAAHVRAFGEDVVPVNYDDIDKTE
LLIICGANTAWTHPVLFRRIQQARENNPNLKLVVIDPRETVTAQQADLHLPIKNDGDVSLFNGLLKFLIEQQCIDSEYIH
SYTDGFDALTEEVSDLRYDVTNLTSSIGISEEKLTTFFQWFAQSSTAITLFCQGVNQAENGVDKGNAIINAHLASGKIAK
SGCGPFSITGQPNAMGGREVGGLANQLAVHRAFDAESIKQVQAFWDSPEIATQPGLKAVDLFEAVERGEIKVLWIMATNP
VVSLPDNQLVKRALEVCPFVIVSDITADSDVAHYADLLLPAAGWGEKQGMVTNSERRLSRQRQFQMPPGEAKSDWWAISQ
VGQALCALEKTQNGFAFTSERSVFREYTAMTGMNADSPLKLDLSQHANLTEQEYEEWVPTQWGGERPFEDGVYSHPDGKA
RFVVTSESPTRLERTKGWWLNTGRQRDQWHTMTRTGHIAHLAASELEPTVYMNTLSATQSCLKVGQLTKLFQPTSNTSIY
AKVAIDEGLGFQELFMSMHWAGRYGGESSVNAIVNSAKDPISGQPAFKSSYVEVQDAAVKTYGMFIGTQFDSGKFLYSAF
QAESNLGIWRFAHDKRPKKQSFCRTEKSRRITIDIAQGWLAVDYDLVGDVRIIRSVLLVSSEPIQTDYTNFTGLIGKPME
LSQLLTITQSQSSAKLVCSCFRVTDKQIHDAMEKQDCTSLTQLQNKLKCGTNCGSCVSQIKQMVDSHQHQKVKQQASQQS
LAIQIK

Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788534, Length=793, Percent_Identity=27.9949558638083, Blast_Score=264, Evalue=2e-71,
Organism=Escherichia coli, GI3868721, Length=490, Percent_Identity=27.1428571428571, Blast_Score=212, Evalue=8e-56,
Organism=Escherichia coli, GI3868720, Length=625, Percent_Identity=23.04, Blast_Score=137, Evalue=3e-33,
Organism=Escherichia coli, GI3868719, Length=263, Percent_Identity=30.4182509505703, Blast_Score=132, Evalue=1e-31,
Organism=Escherichia coli, GI1787778, Length=369, Percent_Identity=23.8482384823848, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1787870, Length=532, Percent_Identity=22.5563909774436, Blast_Score=81, Evalue=3e-16,
Organism=Escherichia coli, GI87081797, Length=449, Percent_Identity=22.71714922049, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR007419
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: =1.7.99.4 [H]

Molecular weight: Translated: 97827; Mature: 97696

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGCKKTTCPYCGVGCGVEVNAKGIVGDACHPANAGSLCVKGVALAESLNMPSRLLYPK
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LVTKLRPQGQEVQWQQATDLIAEKIHQAKAEFGPDSVAMYVSGQLLTEDYYVANKLMKGY
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHHHHHHHHHCC
VGSANIDTNSRLCMSSAVAAHVRAFGEDVVPVNYDDIDKTELLIICGANTAWTHPVLFRR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH
IQQARENNPNLKLVVIDPRETVTAQQADLHLPIKNDGDVSLFNGLLKFLIEQQCIDSEYI
HHHHHCCCCCEEEEEECCCHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH
HSYTDGFDALTEEVSDLRYDVTNLTSSIGISEEKLTTFFQWFAQSSTAITLFCQGVNQAE
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH
NGVDKGNAIINAHLASGKIAKSGCGPFSITGQPNAMGGREVGGLANQLAVHRAFDAESIK
CCCCCCCEEEEEEECCCCEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
QVQAFWDSPEIATQPGLKAVDLFEAVERGEIKVLWIMATNPVVSLPDNQLVKRALEVCPF
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEEECCCHHHHHHHHHHCCE
VIVSDITADSDVAHYADLLLPAAGWGEKQGMVTNSERRLSRQRQFQMPPGEAKSDWWAIS
EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCCHHHHHH
QVGQALCALEKTQNGFAFTSERSVFREYTAMTGMNADSPLKLDLSQHANLTEQEYEEWVP
HHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCHHHHHHCCC
TQWGGERPFEDGVYSHPDGKARFVVTSESPTRLERTKGWWLNTGRQRDQWHTMTRTGHIA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCEECCCCCCCHHHHHHCCCCHH
HLAASELEPTVYMNTLSATQSCLKVGQLTKLFQPTSNTSIYAKVAIDEGLGFQELFMSMH
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHH
WAGRYGGESSVNAIVNSAKDPISGQPAFKSSYVEVQDAAVKTYGMFIGTQFDSGKFLYSA
HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHEEEEEEECCCHHHHHH
FQAESNLGIWRFAHDKRPKKQSFCRTEKSRRITIDIAQGWLAVDYDLVGDVRIIRSVLLV
HHCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHH
SSEPIQTDYTNFTGLIGKPMELSQLLTITQSQSSAKLVCSCFRVTDKQIHDAMEKQDCTS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLQNKLKCGTNCGSCVSQIKQMVDSHQHQKVKQQASQQSLAIQIK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
SQGCKKTTCPYCGVGCGVEVNAKGIVGDACHPANAGSLCVKGVALAESLNMPSRLLYPK
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LVTKLRPQGQEVQWQQATDLIAEKIHQAKAEFGPDSVAMYVSGQLLTEDYYVANKLMKGY
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHHHHHHHHHCC
VGSANIDTNSRLCMSSAVAAHVRAFGEDVVPVNYDDIDKTELLIICGANTAWTHPVLFRR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH
IQQARENNPNLKLVVIDPRETVTAQQADLHLPIKNDGDVSLFNGLLKFLIEQQCIDSEYI
HHHHHCCCCCEEEEEECCCHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH
HSYTDGFDALTEEVSDLRYDVTNLTSSIGISEEKLTTFFQWFAQSSTAITLFCQGVNQAE
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH
NGVDKGNAIINAHLASGKIAKSGCGPFSITGQPNAMGGREVGGLANQLAVHRAFDAESIK
CCCCCCCEEEEEEECCCCEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
QVQAFWDSPEIATQPGLKAVDLFEAVERGEIKVLWIMATNPVVSLPDNQLVKRALEVCPF
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEEECCCHHHHHHHHHHCCE
VIVSDITADSDVAHYADLLLPAAGWGEKQGMVTNSERRLSRQRQFQMPPGEAKSDWWAIS
EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCCHHHHHH
QVGQALCALEKTQNGFAFTSERSVFREYTAMTGMNADSPLKLDLSQHANLTEQEYEEWVP
HHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCHHHHHHCCC
TQWGGERPFEDGVYSHPDGKARFVVTSESPTRLERTKGWWLNTGRQRDQWHTMTRTGHIA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCEECCCCCCCHHHHHHCCCCHH
HLAASELEPTVYMNTLSATQSCLKVGQLTKLFQPTSNTSIYAKVAIDEGLGFQELFMSMH
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHH
WAGRYGGESSVNAIVNSAKDPISGQPAFKSSYVEVQDAAVKTYGMFIGTQFDSGKFLYSA
HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHEEEEEEECCCHHHHHH
FQAESNLGIWRFAHDKRPKKQSFCRTEKSRRITIDIAQGWLAVDYDLVGDVRIIRSVLLV
HHCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHH
SSEPIQTDYTNFTGLIGKPMELSQLLTITQSQSSAKLVCSCFRVTDKQIHDAMEKQDCTS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQLQNKLKCGTNCGSCVSQIKQMVDSHQHQKVKQQASQQSLAIQIK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA