Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976783

Identifier: 156976783

GI number: 156976783

Start: 761668

End: 762294

Strand: Direct

Name: 156976783

Synonym: VIBHAR_05558

Alternate gene names: NA

Gene position: 761668-762294 (Clockwise)

Preceding gene: 156976781

Following gene: 156976784

Centisome position: 34.56

GC content: 46.57

Gene sequence:

>627_bases
ATGCTTACAATACTCTTAGTTGCACTTGCGCTGTATATTTTTTGGCTGTTGTTTCGCAATGGTCCTGCATTTGCTGAGCG
AGTGCCAAACAAAAAGCGTAACTGGGTTGGACCCACGTCGAATCAAAAAGAATGGCAGGGCTATTGTTCCGAAGTCTTTC
AGCCGTTCAGTTCTCAAACCACCTTTTATGCCATCGCCTATTTTGCCAACTTTGTGGCTGCAGCAAACGCCATTTCTTGG
TCGATCGTCTACGAAGGGGACTATTCCATCATCATCAGCCGCTTCGGCAGCTATTTTATCCTCAATACTCATGATGCCTT
GGTCGTATCTGGGTTTGTCGCACTGGCATGTTTCATCATTAATTGGCAAATGGCGGTACATTGCGCTGGGATCATGAGTC
AGTATTTGGTGCGAATCCTGATCATCAATCGTACTCGATTTGTCGCGATCAGTTTGGTGTTCTGCAGTTACTTTGCGTAC
TTGCTGACAGTCGGCATTTTCTGGTTGTTCCACGACGGATACTCCATTTGGCATGGGCTTACGCTCACTCCGGTATTTCT
GCTGTTGGCTTTGTTGCTCGCGGTTGTGTTGCCATCGGTGAAGAAAGAACCAGCTGAAAAAGAGTAA

Upstream 100 bases:

>100_bases
ACAATGCATTAAAACAAGATTAAGCACAAAAACAGGGAAGTGCAGTTTACGACCCCAACGCCAATGGCAGTGGAAAAGGA
CATTTCTGGAGGGGAAGGGT

Downstream 100 bases:

>100_bases
GTACCACTTATTTCATTGAGTTGCGGTAGTAATTCCACTGAGGTTGAGGTAGGATCGCCGACCTTTTTTTCGTCAGTGGG
AGGACTTATGTATATTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLTILLVALALYIFWLLFRNGPAFAERVPNKKRNWVGPTSNQKEWQGYCSEVFQPFSSQTTFYAIAYFANFVAAANAISW
SIVYEGDYSIIISRFGSYFILNTHDALVVSGFVALACFIINWQMAVHCAGIMSQYLVRILIINRTRFVAISLVFCSYFAY
LLTVGIFWLFHDGYSIWHGLTLTPVFLLLALLLAVVLPSVKKEPAEKE

Sequences:

>Translated_208_residues
MLTILLVALALYIFWLLFRNGPAFAERVPNKKRNWVGPTSNQKEWQGYCSEVFQPFSSQTTFYAIAYFANFVAAANAISW
SIVYEGDYSIIISRFGSYFILNTHDALVVSGFVALACFIINWQMAVHCAGIMSQYLVRILIINRTRFVAISLVFCSYFAY
LLTVGIFWLFHDGYSIWHGLTLTPVFLLLALLLAVVLPSVKKEPAEKE
>Mature_208_residues
MLTILLVALALYIFWLLFRNGPAFAERVPNKKRNWVGPTSNQKEWQGYCSEVFQPFSSQTTFYAIAYFANFVAAANAISW
SIVYEGDYSIIISRFGSYFILNTHDALVVSGFVALACFIINWQMAVHCAGIMSQYLVRILIINRTRFVAISLVFCSYFAY
LLTVGIFWLFHDGYSIWHGLTLTPVFLLLALLLAVVLPSVKKEPAEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23637; Mature: 23637

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTILLVALALYIFWLLFRNGPAFAERVPNKKRNWVGPTSNQKEWQGYCSEVFQPFSSQT
CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
TFYAIAYFANFVAAANAISWSIVYEGDYSIIISRFGSYFILNTHDALVVSGFVALACFII
HHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHH
NWQMAVHCAGIMSQYLVRILIINRTRFVAISLVFCSYFAYLLTVGIFWLFHDGYSIWHGL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCH
TLTPVFLLLALLLAVVLPSVKKEPAEKE
HHHHHHHHHHHHHHHHCCHHCCCCCCCC
>Mature Secondary Structure
MLTILLVALALYIFWLLFRNGPAFAERVPNKKRNWVGPTSNQKEWQGYCSEVFQPFSSQT
CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
TFYAIAYFANFVAAANAISWSIVYEGDYSIIISRFGSYFILNTHDALVVSGFVALACFII
HHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHH
NWQMAVHCAGIMSQYLVRILIINRTRFVAISLVFCSYFAYLLTVGIFWLFHDGYSIWHGL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCH
TLTPVFLLLALLLAVVLPSVKKEPAEKE
HHHHHHHHHHHHHHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA