| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976737
Identifier: 156976737
GI number: 156976737
Start: 721908
End: 722261
Strand: Reverse
Name: 156976737
Synonym: VIBHAR_05512
Alternate gene names: NA
Gene position: 722261-721908 (Counterclockwise)
Preceding gene: 156976739
Following gene: 156976736
Centisome position: 32.77
GC content: 42.37
Gene sequence:
>354_bases ATGAAACATATGCTCAGCGCACCAGAGATTTATCTGTATCGTGAGAGTGTCGATTTTAGAAAGTCCATCAATGGCCTCGC GGCGATTATCGAAAGTGACACCGATTTACCTCTAGGAAGCGGCGCACTGTTCCTGTTCACCAATAAACAGCGCGACAAAA TCAAAGTGCTGTACTGGGATAAAACTGGCTTTGCGCTTTGGTATAAACGCCTTGAAAAAGCCAAGTATAAATGGCCTACA AAAGAGCAAAATGAAGTGTTTACCCTGACTCAATTCGAGCTTGATAGACTGCTTTCTGGCTTCACGATTATCGGCCATAA ACCCGTTCAAATAAACGATTTTACAATGACTTAA
Upstream 100 bases:
>100_bases TAGCCACCGCTAACATGACACTTCTCATCAATGATGTGGAGTTGAGCATTCCTCAAGGCACGCCCGCTGCCTACCTGGCA GAACTCATTGGAGCCTTGTC
Downstream 100 bases:
>100_bases TCGATAATAAAGCCTTATCTACCAAGCGTTAACGGCATGATTTTTAGTATAATAAATGCCATGAAAAAGACGCCAAATAT TAACCCAGAAAGCCAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; IS66 Orf2 Like; Transposase ORF_A; Transposase-Like Protein; Transposase Orf2 For Insertion Sequence Element; Transposase And Inactivated Derivatives; Orphan Protein; Transposase Family Protein; IS66 Family Element Orf2 Protein; Transposase Truncated; Insertion Sequence Transposase Protein; IS66 Family Transposase; IS66 Orf2 Like Protein; Transposase Protein
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKHMLSAPEIYLYRESVDFRKSINGLAAIIESDTDLPLGSGALFLFTNKQRDKIKVLYWDKTGFALWYKRLEKAKYKWPT KEQNEVFTLTQFELDRLLSGFTIIGHKPVQINDFTMT
Sequences:
>Translated_117_residues MKHMLSAPEIYLYRESVDFRKSINGLAAIIESDTDLPLGSGALFLFTNKQRDKIKVLYWDKTGFALWYKRLEKAKYKWPT KEQNEVFTLTQFELDRLLSGFTIIGHKPVQINDFTMT >Mature_117_residues MKHMLSAPEIYLYRESVDFRKSINGLAAIIESDTDLPLGSGALFLFTNKQRDKIKVLYWDKTGFALWYKRLEKAKYKWPT KEQNEVFTLTQFELDRLLSGFTIIGHKPVQINDFTMT
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13711; Mature: 13711
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHMLSAPEIYLYRESVDFRKSINGLAAIIESDTDLPLGSGALFLFTNKQRDKIKVLYWD CCCCCCCCEEEEEECCCCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEC KTGFALWYKRLEKAKYKWPTKEQNEVFTLTQFELDRLLSGFTIIGHKPVQINDFTMT CCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCEEEECCCCEEEEEEEEC >Mature Secondary Structure MKHMLSAPEIYLYRESVDFRKSINGLAAIIESDTDLPLGSGALFLFTNKQRDKIKVLYWD CCCCCCCCEEEEEECCCCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEC KTGFALWYKRLEKAKYKWPTKEQNEVFTLTQFELDRLLSGFTIIGHKPVQINDFTMT CCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA