| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976694
Identifier: 156976694
GI number: 156976694
Start: 683248
End: 684126
Strand: Direct
Name: 156976694
Synonym: VIBHAR_05469
Alternate gene names: NA
Gene position: 683248-684126 (Clockwise)
Preceding gene: 156976693
Following gene: 156976695
Centisome position: 31.0
GC content: 46.53
Gene sequence:
>879_bases ATGCTTAACTCAGAACGCAAAGCTGCATTCGTGCTCGTCGCAACTACGATGATCGCGGCTCTAGGGTGGATTTTCTCTAA AGAAACCATTCAAGGTCTACCACCATTCGGATTCATCGGTCTGCGATTTACCATCGCTTCTCTATGCTTACTGCCTTTAT GCATTAAGCCGCTTCGTGCCGCTAATAAGAAAGATATTTTTGCGGCTGCGGGGGTTGGCGTGCTTTTAGGTGGCGCATTA ATGTGCTGGATCTACGCGATTTCTATCAGTGATACGCTGGGCGAGGGCGCATTCATCATGAGTCTTTCGATGCTGTTTGT GCCAATCGTTGCTTGGGTCATGTTCCGTCAAAGACCACAACGAATTTTCTGGATCTCTCTGCCAATCGCGATTCTAGGCT TAGGGTGTTTGTCTTTGGCTGGTGGCTGGCAACAATCTACCAGTCAACTTTGGTTTTTGGGTGCAGCTTTGATGCTCGCT TTGCACTTCAACGTCAATAGTAAGTACTCGCAGAAATTGCCGGTATTGTTGCTGACGTGTATTCAGCTGTTTATCACGGG TTTGATAGGTTTACTGATTTCATCTTTAGTGGAAACGGTGCCTGAAGAAGTGTCGACTTCTATCTGGATTTGGTTTGCTC TTAGTACGCTTTTGGCAACGAGCTTACGCTATGTGATGCAAACCATGGGACAGAAGTTTGTTCAATCGGGCACCGCAGCG CTGATTATGATTCTCGAACCCGTGTGGACTGTGATACTCAGTGTGCTTTGGTACGGTGAGGTTTTGACTGCAAATAAGTT GGTTGGTTGTGCACTTATCTTGTTTTCATTGTTGATCTACCGAACTGGCGGCAAACTCCGTTTTCCAAAACGTGCTTAG
Upstream 100 bases:
>100_bases TTCAGCATTTGCGATAAGAATACAATCAGCTATCACGCATTAAAATCAATGATATCTAAACCCTGAAGATTCCGTCGTCG GGTATTTTTTGTGAGTAATT
Downstream 100 bases:
>100_bases TTCAATTCACTTTATAGAGCCAACTTAACTATCGTTGGCTCTACCTTTCTAGTCTCTCTTGGTTAATTTATAGGTATGAA TGCGAAGTTGTTCACAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLNSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCIKPLRAANKKDIFAAAGVGVLLGGAL MCWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMFRQRPQRIFWISLPIAILGLGCLSLAGGWQQSTSQLWFLGAALMLA LHFNVNSKYSQKLPVLLLTCIQLFITGLIGLLISSLVETVPEEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQSGTAA LIMILEPVWTVILSVLWYGEVLTANKLVGCALILFSLLIYRTGGKLRFPKRA
Sequences:
>Translated_292_residues MLNSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCIKPLRAANKKDIFAAAGVGVLLGGAL MCWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMFRQRPQRIFWISLPIAILGLGCLSLAGGWQQSTSQLWFLGAALMLA LHFNVNSKYSQKLPVLLLTCIQLFITGLIGLLISSLVETVPEEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQSGTAA LIMILEPVWTVILSVLWYGEVLTANKLVGCALILFSLLIYRTGGKLRFPKRA >Mature_292_residues MLNSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCIKPLRAANKKDIFAAAGVGVLLGGAL MCWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMFRQRPQRIFWISLPIAILGLGCLSLAGGWQQSTSQLWFLGAALMLA LHFNVNSKYSQKLPVLLLTCIQLFITGLIGLLISSLVETVPEEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQSGTAA LIMILEPVWTVILSVLWYGEVLTANKLVGCALILFSLLIYRTGGKLRFPKRA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32012; Mature: 32012
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCIKPLRA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC ANKKDIFAAAGVGVLLGGALMCWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMFRQRPQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC RIFWISLPIAILGLGCLSLAGGWQQSTSQLWFLGAALMLALHFNVNSKYSQKLPVLLLTC EEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHH IQLFITGLIGLLISSLVETVPEEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQSGTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIMILEPVWTVILSVLWYGEVLTANKLVGCALILFSLLIYRTGGKLRFPKRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLNSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCIKPLRA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC ANKKDIFAAAGVGVLLGGALMCWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMFRQRPQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC RIFWISLPIAILGLGCLSLAGGWQQSTSQLWFLGAALMLALHFNVNSKYSQKLPVLLLTC EEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHH IQLFITGLIGLLISSLVETVPEEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQSGTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIMILEPVWTVILSVLWYGEVLTANKLVGCALILFSLLIYRTGGKLRFPKRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA