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The map label for this gene is mbaA [H]

Identifier: 156976668

GI number: 156976668

Start: 656220

End: 657839

Strand: Direct

Name: mbaA [H]

Synonym: VIBHAR_05442

Alternate gene names: 156976668

Gene position: 656220-657839 (Clockwise)

Preceding gene: 156976666

Following gene: 156976669

Centisome position: 29.77

GC content: 43.09

Gene sequence:

>1620_bases
TTGAATCCTGTCTTATCTTTCTCAAAACTTAAGTTCTTCTGTCTGCGTTTTGTCGTTATCTTCTTCCTGCTCGTTGCGGT
GTTTGGTGTCATCATTCACTACGATACGTCTGCGTCTGAAGAAGCGGAAAAGAGCAACATTCGTGTGCAACAAAAAGCGT
TATTACAGGGCAAGAAGCAATACATCGAGTGGGTGATAAGGTCGGTTGTCCGCGAAACTGCATTGTTGGCTGACATTATG
TCCGCAAAGCGAGTTTATGAGATTACCGATCTTCCTTTGGATGAGCAGCGTAGTGCACAGCTTTCTCGTTTACGGTCAAT
TTTAGAAGCAGTGAGCCAGCGAAAAGAAGTCTATGATCAATTGCGGTATATAGATATGAAGGGTAATGAAGTAGTTCGTA
TCAATTTTGATCAGCACCATTCTCATATTGTTCCAGAAATAGAACTTCAAAACAAAAGCCATCGTTACTACTTTTCAGAA
GCCCTAAAACTTGGTTGCAACAAAATGTATGTTTCACCCATGGATTTGAATGTAGAACAAGGGGAGATTGAAGAGCCAGC
TAAGCCGATGATCCGTTTAGCGACGCCTGTTTTAGACCAAGATGGAAAGAAGCGGGGTATTGTGGTTGTGAACTACTTGG
CTAACTATCTTATGGAAGGCATGCAATTGTTCAACCTTGATCAGGGAGCGAACTATATGCTTCTAAATAAAAATGGCTTC
TATCTGTTCAATAAAGAGCACCGGGAGGCTGAGTTTGCGTTCATGTACGACGATCGACAAGACGAAACCATTTACGCTGA
TTACCCAGAGTTAGCCGATCAAATTCGAAATACGCTCTCCGGACAGATTGAAACTGATGAGGGCGTTTTAACGATTGAGT
CGGTCGGCACCGATGGCTATCACAACCCATATTGCTTTCATGATTATTATGTTAGTGAAAGCAGCTCAACATCTTGGAAG
TTAGTCTCTTATGTTGATTTCAATAAGAGAGAAAATATATCTAAATCTAAGTACGAACATGAATGGCTTATGCAAGTGGG
TGTGGTGTTGAGTATCGTTTTGGCTTATCTCATTGCACGCTTTCAGCTTCGTGCGTTTTCGGACAACCAACGTATTTACT
ACCTAGCGCATCATGACAGTCTGACTGGTTTGGTTAACCGAGCTGCTTTTCAAAGCCAAGCATCGGAGACTTTGTCCCAA
TGTTTGAAAGCGGGTAGAGAGGTGTGCTTGATATATCTTGACCTTGATAACTTTAAGTTTATCAATGATGAATACGGCCA
TGCGGCGGGCGATAAGACCCTTCAACACGTCGCTTCCGTGATGCAGCGAGTGTTTGGCAGTAAAGCGCTTCTTGCTCGAT
TAGGGGGCGATGAGTTCGCTATTCTGTTGAGCAGTCAAGAACATATGCAAGATCCAGAACATTTCGCGTCGTCTTTGATT
CAATTGATTCAAGACCCGATCGAGGTTCGCCCTGATGTGTTCCATCAAGTCACGACCTCAATTGGTGGTTGCTATGCGAA
AGAAACAACCTGCACCTTGGATGAGTTAATGCATCAAGCGGATATGGCGATGTATGAAGCGAAGAGGTCGGGAAAAAACC
GGTATTTCTTTATCCAATAA

Upstream 100 bases:

>100_bases
ATTGAGACGATAGAAAACTATTGTCGTCATAAATCTATCTGTATGTGATATGTGTCACTATAATCGCTGGTTTTCTTACT
GTATAAGAAACGGAGAGCGC

Downstream 100 bases:

>100_bases
GGGAAAAGCACGCATAAAATTAAGAATGCGGAATCGAGTGGTGCGTAATTCCATGAGTTTTTACGCTAACGCATGAGAAA
AGTGAGATAAATCACTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MNPVLSFSKLKFFCLRFVVIFFLLVAVFGVIIHYDTSASEEAEKSNIRVQQKALLQGKKQYIEWVIRSVVRETALLADIM
SAKRVYEITDLPLDEQRSAQLSRLRSILEAVSQRKEVYDQLRYIDMKGNEVVRINFDQHHSHIVPEIELQNKSHRYYFSE
ALKLGCNKMYVSPMDLNVEQGEIEEPAKPMIRLATPVLDQDGKKRGIVVVNYLANYLMEGMQLFNLDQGANYMLLNKNGF
YLFNKEHREAEFAFMYDDRQDETIYADYPELADQIRNTLSGQIETDEGVLTIESVGTDGYHNPYCFHDYYVSESSSTSWK
LVSYVDFNKRENISKSKYEHEWLMQVGVVLSIVLAYLIARFQLRAFSDNQRIYYLAHHDSLTGLVNRAAFQSQASETLSQ
CLKAGREVCLIYLDLDNFKFINDEYGHAAGDKTLQHVASVMQRVFGSKALLARLGGDEFAILLSSQEHMQDPEHFASSLI
QLIQDPIEVRPDVFHQVTTSIGGCYAKETTCTLDELMHQADMAMYEAKRSGKNRYFFIQ

Sequences:

>Translated_539_residues
MNPVLSFSKLKFFCLRFVVIFFLLVAVFGVIIHYDTSASEEAEKSNIRVQQKALLQGKKQYIEWVIRSVVRETALLADIM
SAKRVYEITDLPLDEQRSAQLSRLRSILEAVSQRKEVYDQLRYIDMKGNEVVRINFDQHHSHIVPEIELQNKSHRYYFSE
ALKLGCNKMYVSPMDLNVEQGEIEEPAKPMIRLATPVLDQDGKKRGIVVVNYLANYLMEGMQLFNLDQGANYMLLNKNGF
YLFNKEHREAEFAFMYDDRQDETIYADYPELADQIRNTLSGQIETDEGVLTIESVGTDGYHNPYCFHDYYVSESSSTSWK
LVSYVDFNKRENISKSKYEHEWLMQVGVVLSIVLAYLIARFQLRAFSDNQRIYYLAHHDSLTGLVNRAAFQSQASETLSQ
CLKAGREVCLIYLDLDNFKFINDEYGHAAGDKTLQHVASVMQRVFGSKALLARLGGDEFAILLSSQEHMQDPEHFASSLI
QLIQDPIEVRPDVFHQVTTSIGGCYAKETTCTLDELMHQADMAMYEAKRSGKNRYFFIQ
>Mature_539_residues
MNPVLSFSKLKFFCLRFVVIFFLLVAVFGVIIHYDTSASEEAEKSNIRVQQKALLQGKKQYIEWVIRSVVRETALLADIM
SAKRVYEITDLPLDEQRSAQLSRLRSILEAVSQRKEVYDQLRYIDMKGNEVVRINFDQHHSHIVPEIELQNKSHRYYFSE
ALKLGCNKMYVSPMDLNVEQGEIEEPAKPMIRLATPVLDQDGKKRGIVVVNYLANYLMEGMQLFNLDQGANYMLLNKNGF
YLFNKEHREAEFAFMYDDRQDETIYADYPELADQIRNTLSGQIETDEGVLTIESVGTDGYHNPYCFHDYYVSESSSTSWK
LVSYVDFNKRENISKSKYEHEWLMQVGVVLSIVLAYLIARFQLRAFSDNQRIYYLAHHDSLTGLVNRAAFQSQASETLSQ
CLKAGREVCLIYLDLDNFKFINDEYGHAAGDKTLQHVASVMQRVFGSKALLARLGGDEFAILLSSQEHMQDPEHFASSLI
QLIQDPIEVRPDVFHQVTTSIGGCYAKETTCTLDELMHQADMAMYEAKRSGKNRYFFIQ

Specific function: Plays an essential role in the maintenance and the formation of the three-dimensional structure of the biofilms at the later stages of their development. Absence of mbaA promotes the accumulation of larger amount of biomass on the surfaces at later stage

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type I membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=165, Percent_Identity=36.3636363636364, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788956, Length=169, Percent_Identity=37.2781065088757, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787262, Length=180, Percent_Identity=31.6666666666667, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI87082007, Length=186, Percent_Identity=28.494623655914, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787541, Length=167, Percent_Identity=33.5329341317365, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=34.3373493975904, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1786584, Length=207, Percent_Identity=24.6376811594203, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787802, Length=196, Percent_Identity=30.6122448979592, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1788085, Length=166, Percent_Identity=31.3253012048193, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87081977, Length=215, Percent_Identity=30.2325581395349, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787816, Length=171, Percent_Identity=29.2397660818713, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=28.75, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081974, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787056, Length=170, Percent_Identity=27.6470588235294, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 62119; Mature: 62119

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVLSFSKLKFFCLRFVVIFFLLVAVFGVIIHYDTSASEEAEKSNIRVQQKALLQGKKQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHHHHH
YIEWVIRSVVRETALLADIMSAKRVYEITDLPLDEQRSAQLSRLRSILEAVSQRKEVYDQ
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRYIDMKGNEVVRINFDQHHSHIVPEIELQNKSHRYYFSEALKLGCNKMYVSPMDLNVEQ
HHEEECCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
GEIEEPAKPMIRLATPVLDQDGKKRGIVVVNYLANYLMEGMQLFNLDQGANYMLLNKNGF
CCCCCCHHHHHHHHCCHHCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCCCEEEEECCCE
YLFNKEHREAEFAFMYDDRQDETIYADYPELADQIRNTLSGQIETDEGVLTIESVGTDGY
EEECCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCEECCCCEEEEEECCCCCC
HNPYCFHDYYVSESSSTSWKLVSYVDFNKRENISKSKYEHEWLMQVGVVLSIVLAYLIAR
CCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FQLRAFSDNQRIYYLAHHDSLTGLVNRAAFQSQASETLSQCLKAGREVCLIYLDLDNFKF
HHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEE
INDEYGHAAGDKTLQHVASVMQRVFGSKALLARLGGDEFAILLSSQEHMQDPEHFASSLI
ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHHCCCHHHHHHHHH
QLIQDPIEVRPDVFHQVTTSIGGCYAKETTCTLDELMHQADMAMYEAKRSGKNRYFFIQ
HHHHCHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MNPVLSFSKLKFFCLRFVVIFFLLVAVFGVIIHYDTSASEEAEKSNIRVQQKALLQGKKQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHHHHH
YIEWVIRSVVRETALLADIMSAKRVYEITDLPLDEQRSAQLSRLRSILEAVSQRKEVYDQ
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRYIDMKGNEVVRINFDQHHSHIVPEIELQNKSHRYYFSEALKLGCNKMYVSPMDLNVEQ
HHEEECCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
GEIEEPAKPMIRLATPVLDQDGKKRGIVVVNYLANYLMEGMQLFNLDQGANYMLLNKNGF
CCCCCCHHHHHHHHCCHHCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCCCEEEEECCCE
YLFNKEHREAEFAFMYDDRQDETIYADYPELADQIRNTLSGQIETDEGVLTIESVGTDGY
EEECCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCEECCCCEEEEEECCCCCC
HNPYCFHDYYVSESSSTSWKLVSYVDFNKRENISKSKYEHEWLMQVGVVLSIVLAYLIAR
CCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FQLRAFSDNQRIYYLAHHDSLTGLVNRAAFQSQASETLSQCLKAGREVCLIYLDLDNFKF
HHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEE
INDEYGHAAGDKTLQHVASVMQRVFGSKALLARLGGDEFAILLSSQEHMQDPEHFASSLI
ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHHCCCHHHHHHHHH
QLIQDPIEVRPDVFHQVTTSIGGCYAKETTCTLDELMHQADMAMYEAKRSGKNRYFFIQ
HHHHCHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]