Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976664

Identifier: 156976664

GI number: 156976664

Start: 653307

End: 653570

Strand: Direct

Name: 156976664

Synonym: VIBHAR_05438

Alternate gene names: NA

Gene position: 653307-653570 (Clockwise)

Preceding gene: 156976663

Following gene: 156976666

Centisome position: 29.64

GC content: 45.08

Gene sequence:

>264_bases
ATGAAAAGCAATAGAAGTAAGATCATTGCGCTTTCCTCTGCGGTTGTTTTCGCTTTGGCTATTGCCGCTTTAAAATTTGA
AAACACCCTCGGACTGCTTCCTATCCTTGTAGCGATTGTCGCGTTCTTTACCTGTGTGATTCACACCAGTATGCACCTTT
CTGGTGTCACAAATGCCGATGCGTTAGGTTATTACCAACAAGCTCAACAGACAAAAGCGGAAGCGCTGCATAGAGGCTTA
GACCCTCGCGATAAAAAGCGTTGA

Upstream 100 bases:

>100_bases
GCTCAAATTTTGTGGAGTATGAAAGGAGTAGCATTAAGGCGTGAAGTGGAGAAGTAATACTGACTCACTTTGATCTCTCG
TTCAAATAAGGCGAACTATC

Downstream 100 bases:

>100_bases
AGCATGTCACATTCTCCGTATACTTTGGACAAGCATTAAAGCACAAGTTTGTCGGAGAAGAGCATGTCACATCGAGTACC
TACTAACATACTGACGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKSNRSKIIALSSAVVFALAIAALKFENTLGLLPILVAIVAFFTCVIHTSMHLSGVTNADALGYYQQAQQTKAEALHRGL
DPRDKKR

Sequences:

>Translated_87_residues
MKSNRSKIIALSSAVVFALAIAALKFENTLGLLPILVAIVAFFTCVIHTSMHLSGVTNADALGYYQQAQQTKAEALHRGL
DPRDKKR
>Mature_87_residues
MKSNRSKIIALSSAVVFALAIAALKFENTLGLLPILVAIVAFFTCVIHTSMHLSGVTNADALGYYQQAQQTKAEALHRGL
DPRDKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9455; Mature: 9455

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNRSKIIALSSAVVFALAIAALKFENTLGLLPILVAIVAFFTCVIHTSMHLSGVTNAD
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ALGYYQQAQQTKAEALHRGLDPRDKKR
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKSNRSKIIALSSAVVFALAIAALKFENTLGLLPILVAIVAFFTCVIHTSMHLSGVTNAD
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ALGYYQQAQQTKAEALHRGLDPRDKKR
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA