| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976656
Identifier: 156976656
GI number: 156976656
Start: 648418
End: 648666
Strand: Direct
Name: 156976656
Synonym: VIBHAR_05430
Alternate gene names: NA
Gene position: 648418-648666 (Clockwise)
Preceding gene: 156976654
Following gene: 156976657
Centisome position: 29.42
GC content: 46.99
Gene sequence:
>249_bases ATGACCATGAATTTTGATATCAATGCACTGAAACACCACCAACTGGTTGAAGATGGCCAGCTAGAAGGGTGTTACCTCCA TCAACCTGCAAAGGGCAGTCAGCAAGATGACAAAGCTGTTTTGGCAGAACGCCAAGCGTTGGAAAAAATGGGGTACAAGG TGATTCAGGTTCAAGCCAAATGCGGCACAACAACGTTTGCTGAGGCGATGCAAACGTTTGTGAAAAAGACCGGGCACCAG CCTCAATAA
Upstream 100 bases:
>100_bases AACTCTGCCTCGCACTAAAAATTGAAGGCTTAGACAGTGTTGTTAAGCCTTTAAAGCGCATGTAACCTGCTACAGCAACT CCCCATTTTTAAATAAAAGA
Downstream 100 bases:
>100_bases CAAACGGCTCAATAATAAACGGATAGGTCCGACCAAAGCCTGAGGGCTCCCCACAACTAGCATAGAAGAATCATGTAGAT AGCGTGAAAAGTAGGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTMNFDINALKHHQLVEDGQLEGCYLHQPAKGSQQDDKAVLAERQALEKMGYKVIQVQAKCGTTTFAEAMQTFVKKTGHQ PQ
Sequences:
>Translated_82_residues MTMNFDINALKHHQLVEDGQLEGCYLHQPAKGSQQDDKAVLAERQALEKMGYKVIQVQAKCGTTTFAEAMQTFVKKTGHQ PQ >Mature_81_residues TMNFDINALKHHQLVEDGQLEGCYLHQPAKGSQQDDKAVLAERQALEKMGYKVIQVQAKCGTTTFAEAMQTFVKKTGHQP Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9191; Mature: 9059
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMNFDINALKHHQLVEDGQLEGCYLHQPAKGSQQDDKAVLAERQALEKMGYKVIQVQAK CCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC CGTTTFAEAMQTFVKKTGHQPQ CCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TMNFDINALKHHQLVEDGQLEGCYLHQPAKGSQQDDKAVLAERQALEKMGYKVIQVQAK CCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC CGTTTFAEAMQTFVKKTGHQPQ CCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA