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The map label for this gene is elbB [H]

Identifier: 156976639

GI number: 156976639

Start: 636244

End: 636894

Strand: Reverse

Name: elbB [H]

Synonym: VIBHAR_05413

Alternate gene names: 156976639

Gene position: 636894-636244 (Counterclockwise)

Preceding gene: 156976641

Following gene: 156976638

Centisome position: 28.9

GC content: 48.23

Gene sequence:

>651_bases
ATGAAAAAAGTCGCAGTTATTTTAAGTGGCTCAGGCGTTTACGACGGTTCTGAGATCCACGAAGCAGTATTGGCGCTCTA
CGCCATCGAGAAAGCAGGGGCAACTTGGCACTGCTTTGCACCTAACATTGACCAACTCCACGTCATCAACCACCTAACTG
GTGACGAAATGGATGAAACACGCAACGTCTTAATCGAAGCGGCTCGTATCGCTCGCGGTAACATTGATGATGTCGCCAAA
CTCAACGTTGATGAATACGATGCCCTACTGCTTCCGGGTGGATTTGGTGCAGCGAAAAACTTAACCGACTTCGCCGTCTC
AGGAGCGGAATGTTCGATTAATACTCATGTAGCCCAAGCGTGTCGTGCATTCGCTCAAGCGGGCAAACCTGCGGGCTATT
TATGCATCGCGCCAACCATTATCCCTCTGATTTACGGCCAAGGCGTACAAGGCACAATTGGTAACGATGAAGCAACGGCT
GCTGCATTTGGTCATATGGGTGGAGAGCACGTAAACTGTCAGGTAGACGAGATACACTTCGACGAGAAACACAACGTACT
TTCAACTCCAGCTTATATGTTAGCGGAGAATATCTCTCAAGCTGCGTCAGGCATTGAAAAACTGGTTGATAAGTTAGTCA
AAATCGCCTAA

Upstream 100 bases:

>100_bases
TGAAGACGACGAGAGTGAAAACGTTAAAACACATTCGGAAACGCATGGCCTAGATAGTGAAGAACAATCTAAAGAACGTT
CAGAGTAAAGGAATCCAATC

Downstream 100 bases:

>100_bases
TTCGAAAACGTTTGCTTAAAACACATCATACCAATCCCCGTTGATAAAGAACATATTAATGGGGATTTGTTATACTTTCT
CCTCACTTAATCTAGAAACA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKVAVILSGSGVYDGSEIHEAVLALYAIEKAGATWHCFAPNIDQLHVINHLTGDEMDETRNVLIEAARIARGNIDDVAK
LNVDEYDALLLPGGFGAAKNLTDFAVSGAECSINTHVAQACRAFAQAGKPAGYLCIAPTIIPLIYGQGVQGTIGNDEATA
AAFGHMGGEHVNCQVDEIHFDEKHNVLSTPAYMLAENISQAASGIEKLVDKLVKIA

Sequences:

>Translated_216_residues
MKKVAVILSGSGVYDGSEIHEAVLALYAIEKAGATWHCFAPNIDQLHVINHLTGDEMDETRNVLIEAARIARGNIDDVAK
LNVDEYDALLLPGGFGAAKNLTDFAVSGAECSINTHVAQACRAFAQAGKPAGYLCIAPTIIPLIYGQGVQGTIGNDEATA
AAFGHMGGEHVNCQVDEIHFDEKHNVLSTPAYMLAENISQAASGIEKLVDKLVKIA
>Mature_216_residues
MKKVAVILSGSGVYDGSEIHEAVLALYAIEKAGATWHCFAPNIDQLHVINHLTGDEMDETRNVLIEAARIARGNIDDVAK
LNVDEYDALLLPGGFGAAKNLTDFAVSGAECSINTHVAQACRAFAQAGKPAGYLCIAPTIIPLIYGQGVQGTIGNDEATA
AAFGHMGGEHVNCQVDEIHFDEKHNVLSTPAYMLAENISQAASGIEKLVDKLVKIA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=43.0493273542601, Blast_Score=183, Evalue=9e-47,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=36.7713004484305, Blast_Score=137, Evalue=6e-33,
Organism=Escherichia coli, GI87082228, Length=216, Percent_Identity=56.4814814814815, Blast_Score=253, Evalue=7e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22855; Mature: 22855

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVAVILSGSGVYDGSEIHEAVLALYAIEKAGATWHCFAPNIDQLHVINHLTGDEMDET
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCHHHH
RNVLIEAARIARGNIDDVAKLNVDEYDALLLPGGFGAAKNLTDFAVSGAECSINTHVAQA
HHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHH
CRAFAQAGKPAGYLCIAPTIIPLIYGQGVQGTIGNDEATAAAFGHMGGEHVNCQVDEIHF
HHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEE
DEKHNVLSTPAYMLAENISQAASGIEKLVDKLVKIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVAVILSGSGVYDGSEIHEAVLALYAIEKAGATWHCFAPNIDQLHVINHLTGDEMDET
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCHHHH
RNVLIEAARIARGNIDDVAKLNVDEYDALLLPGGFGAAKNLTDFAVSGAECSINTHVAQA
HHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHH
CRAFAQAGKPAGYLCIAPTIIPLIYGQGVQGTIGNDEATAAAFGHMGGEHVNCQVDEIHF
HHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEE
DEKHNVLSTPAYMLAENISQAASGIEKLVDKLVKIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]