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The map label for this gene is yvaQ [H]

Identifier: 156976632

GI number: 156976632

Start: 628931

End: 630931

Strand: Direct

Name: yvaQ [H]

Synonym: VIBHAR_05406

Alternate gene names: 156976632

Gene position: 628931-630931 (Clockwise)

Preceding gene: 156976630

Following gene: 156976634

Centisome position: 28.54

GC content: 47.73

Gene sequence:

>2001_bases
ATGAACCTTACGATATCAGGGAAGTTGCAGCTCAGTTTTGTGCTGCTAGCCGTACTTTTTATGGCATCAGCGGTATTCAC
GTATCGCAACGTCACCACCGTAGAGCAATACGCCTCTTCGCTACTTAAATCCGATTTACCGACCGTAGACACCAGTCGCG
GTATCCAACAGTCCGTTCAAGCGTCGCTGTCTTCTATTCGAGCCTACATGTTGCTAGGTGGCGATGAAGAGGCTAGCGCA
CGTCTAAGTGAGGACGTACGCAATATCATGGCATCTACAGACGAGTCGCTTCCAACGTTGCAGGCTTTGATCTCTGAACA
GGATTTTCAAGCGATCCAAAGCCAGTGGGATGCGGTAAAAGTTTCTCTGAACAAGCTGATTGAGCTCAGCCACAGTGATG
AGAACTTACCCGCGCACAACCTCTTTATTAACGAAGCAGCCCCCATCGCAGAAGTGGCACTTGATCAGCTTCAAAGCTTA
ATCAACGAAGAGTCTGGAAACCCATTTGGTGGAGACAGAAAGCGTCTGTTTAAAGTCTACGCCGACAGCTATACCTCGCT
CGCCAATGCATTGTCTGCTCTGCGAGATTTCCTTTTGTACGGGCAGCAAGACCATCTAGACAAATACCATGATTTGATTA
AGTACCACAATCAGTCTGTCGCGGAAATCGACAGCAAACTCGACAGACTTACCGACAACGACCAATCATTGTGGTCACTG
TTTAAAGAAATGCAGCAACTGTACTTTCCTTTAGCAGAGCAGGTAATTGCATTACGTCAGTCACCAGAATGGAACGAATC
AAACTTGTTGATGGCGAACGAACTGTTGCCTGCAGCAGATGCACTAGACCAAAGCTTAGAGACGATCGTATTGGCGCAGC
AAAGTCGTGCTGATCAAAGCGGACAGGGTATCAATCAGTCGATCAAGAACGTACTCACCACTATGTTGATTGCGGCAGCG
TTGGTTTTGTTTGCCGCGATAGCAATTTCAAAATACATGGGTAATACCATTGGGCGCCGAGTGAAGAACTTGTCGGAACG
AGCAAAGACGATCGCTTCAGGAGACGTTTCTCAGCCTCCGCTCACTGTTGTTGGGAAAGATGAATTGGCAGACCTTACCG
ATTCGATTAACCGTATGAACCAATCGTTAGCGAGCATTGTGGCAGGAGTAAGTGAGAAAGCGAACCAAGTGGATACCAGC
ATGGGGGCTTTATTGGAATCGGCGCAAGTCACCTCATCGAATGTAGAGCAGCAACAGACCAGCATTGTTGAAATGGGAAG
CCAATTGGATGAAATCGCTTTAGCCGCACGTAACGCCCTAGATCAAGCCAATCAATCGGTGCAAAAGCTTTCTGACTCAA
AAGGCGAGATTGAACAAGGGCGTGATGCTTTAGAGCAAAACAAAGTCACCATGGAAAGCTTGCATGGCAGCATTGAAACC
GCGAGTACGCAAGTGACGCAGTTAAGCAAAGAGAGCGAAGCCATTGGCCGAGTTACGGAAGTGATTGAAGGCTTGGCAGA
GCAAACTAACTTACTGGCATTGAATGCGGCGATAGAAGCAGCGCGTGCAGGTGATCAAGGTAGAGGCTTTGCAGTTGTGG
CGGACGAAGTGCGTATGCTGGCGACTCGCACTACTCAATCGACGACAGAAATCAACGGCATCATCAATGCGATTCAACGT
TCGACTAATTCAGTGGTTGAGGAAATTGAACACAGCCAATTACTTGCAGAGCAGGGTGCAGAGCACATTGAAAAAGCGGT
CACTCGTTTGCTCGCTACTACTGAGCAAATCGGTTCTTTGAATGAGCAAATGGCAGAACTTGCGGCAACGGCAGAGCAGC
AATCGCATGCGACCAATTCGATCACGGGATTGATGTCTGATATTACTCAATCAGTGGACGAAGTTTCGAATAACAGCCAA
CGTGCATCAGAGACGTCATTGCAAGTAAAAGAACAAGTTACTGAGCTGAATCAACAGATGGCAACTTTCAAGACCGCATA
A

Upstream 100 bases:

>100_bases
CACCCAGATACATTCTTTTTTGTTTAACTTGTGATACATACATTTAACATTCTTATTAATCTCGTTATATTTAAGGCTCA
TCGTTGTCAGGAGTTTATGG

Downstream 100 bases:

>100_bases
ACTTTATCTAGAAAAGCAAAAGCCCAGTACCTTGCAATAAGATATTGGGCTTTTTGTTGGATGATACGCCGGTATTCGTC
TACTTGCTCATTGGATTTGG

Product: histidine kinase/response regulator hybrid protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MNLTISGKLQLSFVLLAVLFMASAVFTYRNVTTVEQYASSLLKSDLPTVDTSRGIQQSVQASLSSIRAYMLLGGDEEASA
RLSEDVRNIMASTDESLPTLQALISEQDFQAIQSQWDAVKVSLNKLIELSHSDENLPAHNLFINEAAPIAEVALDQLQSL
INEESGNPFGGDRKRLFKVYADSYTSLANALSALRDFLLYGQQDHLDKYHDLIKYHNQSVAEIDSKLDRLTDNDQSLWSL
FKEMQQLYFPLAEQVIALRQSPEWNESNLLMANELLPAADALDQSLETIVLAQQSRADQSGQGINQSIKNVLTTMLIAAA
LVLFAAIAISKYMGNTIGRRVKNLSERAKTIASGDVSQPPLTVVGKDELADLTDSINRMNQSLASIVAGVSEKANQVDTS
MGALLESAQVTSSNVEQQQTSIVEMGSQLDEIALAARNALDQANQSVQKLSDSKGEIEQGRDALEQNKVTMESLHGSIET
ASTQVTQLSKESEAIGRVTEVIEGLAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRMLATRTTQSTTEINGIINAIQR
STNSVVEEIEHSQLLAEQGAEHIEKAVTRLLATTEQIGSLNEQMAELAATAEQQSHATNSITGLMSDITQSVDEVSNNSQ
RASETSLQVKEQVTELNQQMATFKTA

Sequences:

>Translated_666_residues
MNLTISGKLQLSFVLLAVLFMASAVFTYRNVTTVEQYASSLLKSDLPTVDTSRGIQQSVQASLSSIRAYMLLGGDEEASA
RLSEDVRNIMASTDESLPTLQALISEQDFQAIQSQWDAVKVSLNKLIELSHSDENLPAHNLFINEAAPIAEVALDQLQSL
INEESGNPFGGDRKRLFKVYADSYTSLANALSALRDFLLYGQQDHLDKYHDLIKYHNQSVAEIDSKLDRLTDNDQSLWSL
FKEMQQLYFPLAEQVIALRQSPEWNESNLLMANELLPAADALDQSLETIVLAQQSRADQSGQGINQSIKNVLTTMLIAAA
LVLFAAIAISKYMGNTIGRRVKNLSERAKTIASGDVSQPPLTVVGKDELADLTDSINRMNQSLASIVAGVSEKANQVDTS
MGALLESAQVTSSNVEQQQTSIVEMGSQLDEIALAARNALDQANQSVQKLSDSKGEIEQGRDALEQNKVTMESLHGSIET
ASTQVTQLSKESEAIGRVTEVIEGLAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRMLATRTTQSTTEINGIINAIQR
STNSVVEEIEHSQLLAEQGAEHIEKAVTRLLATTEQIGSLNEQMAELAATAEQQSHATNSITGLMSDITQSVDEVSNNSQ
RASETSLQVKEQVTELNQQMATFKTA
>Mature_666_residues
MNLTISGKLQLSFVLLAVLFMASAVFTYRNVTTVEQYASSLLKSDLPTVDTSRGIQQSVQASLSSIRAYMLLGGDEEASA
RLSEDVRNIMASTDESLPTLQALISEQDFQAIQSQWDAVKVSLNKLIELSHSDENLPAHNLFINEAAPIAEVALDQLQSL
INEESGNPFGGDRKRLFKVYADSYTSLANALSALRDFLLYGQQDHLDKYHDLIKYHNQSVAEIDSKLDRLTDNDQSLWSL
FKEMQQLYFPLAEQVIALRQSPEWNESNLLMANELLPAADALDQSLETIVLAQQSRADQSGQGINQSIKNVLTTMLIAAA
LVLFAAIAISKYMGNTIGRRVKNLSERAKTIASGDVSQPPLTVVGKDELADLTDSINRMNQSLASIVAGVSEKANQVDTS
MGALLESAQVTSSNVEQQQTSIVEMGSQLDEIALAARNALDQANQSVQKLSDSKGEIEQGRDALEQNKVTMESLHGSIET
ASTQVTQLSKESEAIGRVTEVIEGLAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRMLATRTTQSTTEINGIINAIQR
STNSVVEEIEHSQLLAEQGAEHIEKAVTRLLATTEQIGSLNEQMAELAATAEQQSHATNSITGLMSDITQSVDEVSNNSQ
RASETSLQVKEQVTELNQQMATFKTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=362, Percent_Identity=27.9005524861878, Blast_Score=129, Evalue=8e-31,
Organism=Escherichia coli, GI1787690, Length=396, Percent_Identity=25.7575757575758, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788195, Length=283, Percent_Identity=29.6819787985866, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI2367378, Length=329, Percent_Identity=30.3951367781155, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1789453, Length=157, Percent_Identity=33.7579617834395, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 72394; Mature: 72394

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTISGKLQLSFVLLAVLFMASAVFTYRNVTTVEQYASSLLKSDLPTVDTSRGIQQSVQ
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ASLSSIRAYMLLGGDEEASARLSEDVRNIMASTDESLPTLQALISEQDFQAIQSQWDAVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VSLNKLIELSHSDENLPAHNLFINEAAPIAEVALDQLQSLINEESGNPFGGDRKRLFKVY
HHHHHHHHHCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ADSYTSLANALSALRDFLLYGQQDHLDKYHDLIKYHNQSVAEIDSKLDRLTDNDQSLWSL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH
FKEMQQLYFPLAEQVIALRQSPEWNESNLLMANELLPAADALDQSLETIVLAQQSRADQS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
GQGINQSIKNVLTTMLIAAALVLFAAIAISKYMGNTIGRRVKNLSERAKTIASGDVSQPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LTVVGKDELADLTDSINRMNQSLASIVAGVSEKANQVDTSMGALLESAQVTSSNVEQQQT
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIVEMGSQLDEIALAARNALDQANQSVQKLSDSKGEIEQGRDALEQNKVTMESLHGSIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCHHHH
ASTQVTQLSKESEAIGRVTEVIEGLAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
ATRTTQSTTEINGIINAIQRSTNSVVEEIEHSQLLAEQGAEHIEKAVTRLLATTEQIGSL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQMAELAATAEQQSHATNSITGLMSDITQSVDEVSNNSQRASETSLQVKEQVTELNQQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ATFKTA
HHHCCC
>Mature Secondary Structure
MNLTISGKLQLSFVLLAVLFMASAVFTYRNVTTVEQYASSLLKSDLPTVDTSRGIQQSVQ
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ASLSSIRAYMLLGGDEEASARLSEDVRNIMASTDESLPTLQALISEQDFQAIQSQWDAVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VSLNKLIELSHSDENLPAHNLFINEAAPIAEVALDQLQSLINEESGNPFGGDRKRLFKVY
HHHHHHHHHCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ADSYTSLANALSALRDFLLYGQQDHLDKYHDLIKYHNQSVAEIDSKLDRLTDNDQSLWSL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH
FKEMQQLYFPLAEQVIALRQSPEWNESNLLMANELLPAADALDQSLETIVLAQQSRADQS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
GQGINQSIKNVLTTMLIAAALVLFAAIAISKYMGNTIGRRVKNLSERAKTIASGDVSQPP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LTVVGKDELADLTDSINRMNQSLASIVAGVSEKANQVDTSMGALLESAQVTSSNVEQQQT
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIVEMGSQLDEIALAARNALDQANQSVQKLSDSKGEIEQGRDALEQNKVTMESLHGSIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCHHHH
ASTQVTQLSKESEAIGRVTEVIEGLAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH
ATRTTQSTTEINGIINAIQRSTNSVVEEIEHSQLLAEQGAEHIEKAVTRLLATTEQIGSL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQMAELAATAEQQSHATNSITGLMSDITQSVDEVSNNSQRASETSLQVKEQVTELNQQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ATFKTA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]