Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976624

Identifier: 156976624

GI number: 156976624

Start: 620449

End: 621612

Strand: Reverse

Name: 156976624

Synonym: VIBHAR_05398

Alternate gene names: NA

Gene position: 621612-620449 (Counterclockwise)

Preceding gene: 156976631

Following gene: 156976622

Centisome position: 28.2

GC content: 46.91

Gene sequence:

>1164_bases
ATGCCTTCTCAATATAGAATTAACAAAATCGTCGAAATTGGCGATACCTTGCATCGCAGTGGTTGTGCACCTTACAAAGT
AGAGAAATACACTCAGCACTATGCGCAAAAACATGGCGTGGATGTGATGATTCAAGCCACACCAACCGCGATCAATTATC
AGTTTCCTGATGACAACAACGCAGTGGTACTCAAACGCCTAAAACCAGCTTCCATTAACTTGAGTTTGCTGGCCAACACC
ATCATTCGTATCAATCAACCAAGTAGCGAACCTGTCCCTGAACCTGCGGGATATCCTTCATGGATCATCGCATTGGCAAA
CATGGGTATTCCACCCGCTTACTTAATGTTGGTTGGCAGTACCTTGGAAGCGATCGGCTTTGCTTTTATTCTCGGTTTTA
TGGTCTGGGGATGTCAGCAAGTTTGCCGAGCGAGACGTGCAATTGCGGTTGAGTTTATCGCGGCTTTGTTCACTGGCATT
ATTGTCGCTTACCTATCCAGCACTGGATTGCCGATTCCAGTGTGGGCGCTCTGTATCGCTACGATTGTTCTGTTTGTACC
CGGACTTTCTATCGCTAACTCGCTGGAGTGTCTCGCGTTCAACGATTTGGTTTCAGGAACCAGTTTATTAGGGCAATGTG
CACTCACGCTGATCAAACTGTTTGTCGGCATTACCATGGGGCTTAATATCGGTGAAGCCATTTGGGGTCAAGCGCAATCC
ATCGCCTACACCAATGCAGTTCCTATTTGGATGCACATTAGTGGATTGTTCATCATTTCAATCAGCCTTGGGGTGATCTT
TAATGCCCGCCCTATCGACATTCTACTCGGCTTACCTGTGGCAATGTTGGGAATGTGGGGGCCATTTTATCTGGGTTTAG
AAAGTGGCTGGGTTGTGGGCACTTGGGTTACCACTGTACTGATTACCCTATACGGGACTTGGATTGCGAAAAAGATGGAA
CTGACGGGCTCTATCTACATTGTTCAAGGCATTATCATATTGGTTCCGGGTAGCCGTGTATTGGTCAGTGCGAGCCAATC
CGTGTTTGAGCAATCGATTTTGCCGATCCCAAGCATTGGTTTGTCTGCGCTGTTTATGTTCTCGGCGATCGTTGCAGGGC
AAATCACAGCCTATTCTATTTACTCACCAAAAATCGAACGCTAG

Upstream 100 bases:

>100_bases
CACAAAATCACATCAAAAAAGTAATGATTATTCGCTCGATAAGAATCACTTTGTTAACTTACGCGCAATTTTTTTGTGAC
CCAAAATTTTCGCTTTCGCC

Downstream 100 bases:

>100_bases
ACACCGTATCTCCATAACCTTCAGATAAGAAAAAAGCCCTATTCAAAATCCACATTAGTGAGAACTTTGAATAGGGCTCT
TTGCCTCTATGCTTCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MPSQYRINKIVEIGDTLHRSGCAPYKVEKYTQHYAQKHGVDVMIQATPTAINYQFPDDNNAVVLKRLKPASINLSLLANT
IIRINQPSSEPVPEPAGYPSWIIALANMGIPPAYLMLVGSTLEAIGFAFILGFMVWGCQQVCRARRAIAVEFIAALFTGI
IVAYLSSTGLPIPVWALCIATIVLFVPGLSIANSLECLAFNDLVSGTSLLGQCALTLIKLFVGITMGLNIGEAIWGQAQS
IAYTNAVPIWMHISGLFIISISLGVIFNARPIDILLGLPVAMLGMWGPFYLGLESGWVVGTWVTTVLITLYGTWIAKKME
LTGSIYIVQGIIILVPGSRVLVSASQSVFEQSILPIPSIGLSALFMFSAIVAGQITAYSIYSPKIER

Sequences:

>Translated_387_residues
MPSQYRINKIVEIGDTLHRSGCAPYKVEKYTQHYAQKHGVDVMIQATPTAINYQFPDDNNAVVLKRLKPASINLSLLANT
IIRINQPSSEPVPEPAGYPSWIIALANMGIPPAYLMLVGSTLEAIGFAFILGFMVWGCQQVCRARRAIAVEFIAALFTGI
IVAYLSSTGLPIPVWALCIATIVLFVPGLSIANSLECLAFNDLVSGTSLLGQCALTLIKLFVGITMGLNIGEAIWGQAQS
IAYTNAVPIWMHISGLFIISISLGVIFNARPIDILLGLPVAMLGMWGPFYLGLESGWVVGTWVTTVLITLYGTWIAKKME
LTGSIYIVQGIIILVPGSRVLVSASQSVFEQSILPIPSIGLSALFMFSAIVAGQITAYSIYSPKIER
>Mature_386_residues
PSQYRINKIVEIGDTLHRSGCAPYKVEKYTQHYAQKHGVDVMIQATPTAINYQFPDDNNAVVLKRLKPASINLSLLANTI
IRINQPSSEPVPEPAGYPSWIIALANMGIPPAYLMLVGSTLEAIGFAFILGFMVWGCQQVCRARRAIAVEFIAALFTGII
VAYLSSTGLPIPVWALCIATIVLFVPGLSIANSLECLAFNDLVSGTSLLGQCALTLIKLFVGITMGLNIGEAIWGQAQSI
AYTNAVPIWMHISGLFIISISLGVIFNARPIDILLGLPVAMLGMWGPFYLGLESGWVVGTWVTTVLITLYGTWIAKKMEL
TGSIYIVQGIIILVPGSRVLVSASQSVFEQSILPIPSIGLSALFMFSAIVAGQITAYSIYSPKIER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41810; Mature: 41679

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSQYRINKIVEIGDTLHRSGCAPYKVEKYTQHYAQKHGVDVMIQATPTAINYQFPDDNN
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCC
AVVLKRLKPASINLSLLANTIIRINQPSSEPVPEPAGYPSWIIALANMGIPPAYLMLVGS
EEEEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
TLEAIGFAFILGFMVWGCQQVCRARRAIAVEFIAALFTGIIVAYLSSTGLPIPVWALCIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TIVLFVPGLSIANSLECLAFNDLVSGTSLLGQCALTLIKLFVGITMGLNIGEAIWGQAQS
HHHHHHCCCHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHH
IAYTNAVPIWMHISGLFIISISLGVIFNARPIDILLGLPVAMLGMWGPFYLGLESGWVVG
EEECCCCEEEEEHHHHEEEEEEHHHEECCCCHHHHHHHHHHHHHCCCCCEEECCCCEEHH
TWVTTVLITLYGTWIAKKMELTGSIYIVQGIIILVPGSRVLVSASQSVFEQSILPIPSIG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEECHHHHHHHHCCCCCCHH
LSALFMFSAIVAGQITAYSIYSPKIER
HHHHHHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure 
PSQYRINKIVEIGDTLHRSGCAPYKVEKYTQHYAQKHGVDVMIQATPTAINYQFPDDNN
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCC
AVVLKRLKPASINLSLLANTIIRINQPSSEPVPEPAGYPSWIIALANMGIPPAYLMLVGS
EEEEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
TLEAIGFAFILGFMVWGCQQVCRARRAIAVEFIAALFTGIIVAYLSSTGLPIPVWALCIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TIVLFVPGLSIANSLECLAFNDLVSGTSLLGQCALTLIKLFVGITMGLNIGEAIWGQAQS
HHHHHHCCCHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHH
IAYTNAVPIWMHISGLFIISISLGVIFNARPIDILLGLPVAMLGMWGPFYLGLESGWVVG
EEECCCCEEEEEHHHHEEEEEEHHHEECCCCHHHHHHHHHHHHHCCCCCEEECCCCEEHH
TWVTTVLITLYGTWIAKKMELTGSIYIVQGIIILVPGSRVLVSASQSVFEQSILPIPSIG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEECHHHHHHHHCCCCCCHH
LSALFMFSAIVAGQITAYSIYSPKIER
HHHHHHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA