Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976620

Identifier: 156976620

GI number: 156976620

Start: 618462

End: 619004

Strand: Reverse

Name: 156976620

Synonym: VIBHAR_05394

Alternate gene names: NA

Gene position: 619004-618462 (Counterclockwise)

Preceding gene: 156976621

Following gene: 156976619

Centisome position: 28.09

GC content: 45.86

Gene sequence:

>543_bases
ATGACGCCTCTTAATGAACTGATCCAAGAAATGGGGTTCAAAAACATTCCCTTCGTTGACGAGCATAAAGCAGCAAGGCG
ACGCTGGGTAAAAGAACAAGCCCCATTGTTCATTAGAGTATGTGAAAACAAGCCTGACACAGCCCCTGCGCTGCATTTAC
TCGGGCTTTTGACTAAGTCTCACATCGAAGCCAGTGCGCTGTATGAGCAGCACGCCACATCCACTCACAAAATGCAGCAA
GTATTCAGTGATACGTTGGGCGAAGAGCATGCTGAGAAGTTCACTAACCAGTCTGCCGAAAACTTAGTATTGGTCACGCA
CTTATGGCTATACACTCAAGGCTACCTGAATATTGATTTCAGCCTTGCTCATGATCACGCAGAGCAAACACAAAATACCC
TGCAGCATGAGCTGGTGATCAAACGTATGGACTTAGATGCATTCCGTACAGACTTGATGCAAAGCTTTTATCTCGGTAAA
GAAGCGAACCCTGCAAAAGCAAGTGGACTCTTTGGTTGGGTGAAACGTCTTCTTTCCTCATAA

Upstream 100 bases:

>100_bases
GACCGTGGCACTAGCCTATCTGTTATGATTACCGGCACCTCTATTTTCGTTGATATTAACGAACAACACGTCGAAGTGAC
GGTGAAGGAATTGCAAAGTA

Downstream 100 bases:

>100_bases
AAAACATGGTTTTGTCAAAACCAAACACCTGATAGACTACGCCCTCTCATGCAACGGCTCTTTTCGTTAAACGATTTCGT
CACGTCGGTTGTTGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKSHIEASALYEQHATSTHKMQQ
VFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDFSLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGK
EANPAKASGLFGWVKRLLSS

Sequences:

>Translated_180_residues
MTPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKSHIEASALYEQHATSTHKMQQ
VFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDFSLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGK
EANPAKASGLFGWVKRLLSS
>Mature_179_residues
TPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKSHIEASALYEQHATSTHKMQQV
FSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDFSLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGKE
ANPAKASGLFGWVKRLLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20630; Mature: 20499

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKS
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH
HIEASALYEQHATSTHKMQQVFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEH
SLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGKEANPAKASGLFGWVKRLLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKS
CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH
HIEASALYEQHATSTHKMQQVFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEH
SLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGKEANPAKASGLFGWVKRLLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA