| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976620
Identifier: 156976620
GI number: 156976620
Start: 618462
End: 619004
Strand: Reverse
Name: 156976620
Synonym: VIBHAR_05394
Alternate gene names: NA
Gene position: 619004-618462 (Counterclockwise)
Preceding gene: 156976621
Following gene: 156976619
Centisome position: 28.09
GC content: 45.86
Gene sequence:
>543_bases ATGACGCCTCTTAATGAACTGATCCAAGAAATGGGGTTCAAAAACATTCCCTTCGTTGACGAGCATAAAGCAGCAAGGCG ACGCTGGGTAAAAGAACAAGCCCCATTGTTCATTAGAGTATGTGAAAACAAGCCTGACACAGCCCCTGCGCTGCATTTAC TCGGGCTTTTGACTAAGTCTCACATCGAAGCCAGTGCGCTGTATGAGCAGCACGCCACATCCACTCACAAAATGCAGCAA GTATTCAGTGATACGTTGGGCGAAGAGCATGCTGAGAAGTTCACTAACCAGTCTGCCGAAAACTTAGTATTGGTCACGCA CTTATGGCTATACACTCAAGGCTACCTGAATATTGATTTCAGCCTTGCTCATGATCACGCAGAGCAAACACAAAATACCC TGCAGCATGAGCTGGTGATCAAACGTATGGACTTAGATGCATTCCGTACAGACTTGATGCAAAGCTTTTATCTCGGTAAA GAAGCGAACCCTGCAAAAGCAAGTGGACTCTTTGGTTGGGTGAAACGTCTTCTTTCCTCATAA
Upstream 100 bases:
>100_bases GACCGTGGCACTAGCCTATCTGTTATGATTACCGGCACCTCTATTTTCGTTGATATTAACGAACAACACGTCGAAGTGAC GGTGAAGGAATTGCAAAGTA
Downstream 100 bases:
>100_bases AAAACATGGTTTTGTCAAAACCAAACACCTGATAGACTACGCCCTCTCATGCAACGGCTCTTTTCGTTAAACGATTTCGT CACGTCGGTTGTTGCATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKSHIEASALYEQHATSTHKMQQ VFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDFSLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGK EANPAKASGLFGWVKRLLSS
Sequences:
>Translated_180_residues MTPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKSHIEASALYEQHATSTHKMQQ VFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDFSLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGK EANPAKASGLFGWVKRLLSS >Mature_179_residues TPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKSHIEASALYEQHATSTHKMQQV FSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDFSLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGKE ANPAKASGLFGWVKRLLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20630; Mature: 20499
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKS CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH HIEASALYEQHATSTHKMQQVFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEH SLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGKEANPAKASGLFGWVKRLLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TPLNELIQEMGFKNIPFVDEHKAARRRWVKEQAPLFIRVCENKPDTAPALHLLGLLTKS CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH HIEASALYEQHATSTHKMQQVFSDTLGEEHAEKFTNQSAENLVLVTHLWLYTQGYLNIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEH SLAHDHAEQTQNTLQHELVIKRMDLDAFRTDLMQSFYLGKEANPAKASGLFGWVKRLLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA