Click here to switch to the map view.

The map label for this gene is yrhP [H]

Identifier: 156976565

GI number: 156976565

Start: 571267

End: 571830

Strand: Direct

Name: yrhP [H]

Synonym: VIBHAR_05339

Alternate gene names: 156976565

Gene position: 571267-571830 (Clockwise)

Preceding gene: 156976564

Following gene: 156976569

Centisome position: 25.92

GC content: 47.52

Gene sequence:

>564_bases
ATGTCCCCAGGTCCGAGTTTAGCGATTGTCGCTAAGCACTCGTTGGCTGGTGGTCGAGTTAATGGTTTGGCTACCGCATG
GGCGCACGCGTTTGGTATCGGTATTTATGCGTTTATTACCTTGATAGGTTTGGCGGTAGTGCTGCAACAAAGCCCATTGC
TATTTAAGACTATTAGCTTGGCTGGTGCAGCTTACTTGGCGTATCTTGGCTTCAATGCACTGCGCTCAAAAGGTGGGGTT
GCGGCGAAGTTAGAGTCCGGTGAAGAAACGACGGTTTTACAATCGGCGCGAGAAGGCTTCCTCATTTCAATTCTAAGCCC
GAAAATTGCGCTGTTCTTCATCGCACTGTTCAGTCAATTTGTAGCGCTGGGTAACGATCTAAGTAACCAAATGATCATCG
TCGCGACACCATTTGTTGTTGATGGCTTGTGGTACACCTTCATAACATTGGTATTGTCTAACTCGCGCGTTGTGGACCGT
ATTCGCTCAAAAGCGGTGCTGATTGACCGATTATCCGGTATCGTTTTAATGCTACTGGTAGTGCGAGTAGTTGTGACGAT
TTAA

Upstream 100 bases:

>100_bases
AATTATACCTGCTCCGTTGATAGATTAGCGTCAAAGATGGGAGATTCTTATGACACTAACAGTTTGGTTATCACTTTTTA
CCGTGTGTTTATTAGGGGCG

Downstream 100 bases:

>100_bases
CCAAGTCGAACTCATTGTATAAAAAGCAGAGAGGCTACCGAGATGGTAGCCTTTCTTGTATATGGCAGACAAAAAAACAT
CCTAACTCTTAACGAGGTAG

Product: putative threonine efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSPGPSLAIVAKHSLAGGRVNGLATAWAHAFGIGIYAFITLIGLAVVLQQSPLLFKTISLAGAAYLAYLGFNALRSKGGV
AAKLESGEETTVLQSAREGFLISILSPKIALFFIALFSQFVALGNDLSNQMIIVATPFVVDGLWYTFITLVLSNSRVVDR
IRSKAVLIDRLSGIVLMLLVVRVVVTI

Sequences:

>Translated_187_residues
MSPGPSLAIVAKHSLAGGRVNGLATAWAHAFGIGIYAFITLIGLAVVLQQSPLLFKTISLAGAAYLAYLGFNALRSKGGV
AAKLESGEETTVLQSAREGFLISILSPKIALFFIALFSQFVALGNDLSNQMIIVATPFVVDGLWYTFITLVLSNSRVVDR
IRSKAVLIDRLSGIVLMLLVVRVVVTI
>Mature_186_residues
SPGPSLAIVAKHSLAGGRVNGLATAWAHAFGIGIYAFITLIGLAVVLQQSPLLFKTISLAGAAYLAYLGFNALRSKGGVA
AKLESGEETTVLQSAREGFLISILSPKIALFFIALFSQFVALGNDLSNQMIIVATPFVVDGLWYTFITLVLSNSRVVDRI
RSKAVLIDRLSGIVLMLLVVRVVVTI

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=171, Percent_Identity=28.0701754385965, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 19877; Mature: 19746

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGPSLAIVAKHSLAGGRVNGLATAWAHAFGIGIYAFITLIGLAVVLQQSPLLFKTISL
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AGAAYLAYLGFNALRSKGGVAAKLESGEETTVLQSAREGFLISILSPKIALFFIALFSQF
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
VALGNDLSNQMIIVATPFVVDGLWYTFITLVLSNSRVVDRIRSKAVLIDRLSGIVLMLLV
HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRVVVTI
HHHHHCC
>Mature Secondary Structure 
SPGPSLAIVAKHSLAGGRVNGLATAWAHAFGIGIYAFITLIGLAVVLQQSPLLFKTISL
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AGAAYLAYLGFNALRSKGGVAAKLESGEETTVLQSAREGFLISILSPKIALFFIALFSQF
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
VALGNDLSNQMIIVATPFVVDGLWYTFITLVLSNSRVVDRIRSKAVLIDRLSGIVLMLLV
HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRVVVTI
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]