Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976555

Identifier: 156976555

GI number: 156976555

Start: 561824

End: 563233

Strand: Reverse

Name: 156976555

Synonym: VIBHAR_05329

Alternate gene names: NA

Gene position: 563233-561824 (Counterclockwise)

Preceding gene: 156976559

Following gene: 156976554

Centisome position: 25.55

GC content: 46.31

Gene sequence:

>1410_bases
GTGACGATCCCTAGCGTCGTTTCCAAAAAGTTTCCAGCCAAACTGCAAGTGGCTGCTGATGCTGGTTTTACCCACTACCT
TGAAGTCTCCCTTTCGCAAGACGGGAACAATGCGTCGTTCCATATTATCGCGATGGATGACGGGGCGAATGATGAAAAAA
TATTTCGTGCCGCCAAAATCGTTCAGCACCTACTCACAAACCAGCCAAATTCGAAGTATGGTGCCGACAAATCTAGTATC
GCAAAGACACTAGCCGAGCGTGATGCAACATTAATGCTGACAGAAAACGACGACCAGAATGACGAAATGCTCACCAAAAT
TTTCGTCAGTGAGTTGCTTCGTCAAGATAAATTGGACGACGCGATTGCAGATTCTGGCTTACCACAATCCTTTGATACCG
GCTCATTAGAAAACTTTATTGCAACCATGATGGTGCTTAATGAAGACGACATGGACACGCTTATCGAGTCCATTGCATTA
ACGTTGATGAGCAGCGGGGATACACCAAACTGGTTGATGAACAGCCAATCCTTGATGTACCGCGAACTGACGGTTGAAGG
CGATTGTCACTACATGAGTAACTTTGCCGATTACTGTGCCAATCTGGGTGAACATGCCGACCGAGATGCCGCTTTTGAAG
AGATTCTACATTTGGTCCAAGCGCAAGGCATTGCTCCTAACGCATCGACTTCCTCATTACAAAAAGCCATTCAAGCGCAT
GCTCTAAGCATTCATAACGACATCCAATCAGGTAAGCCTACGGTGTGGCGCCCAACCCAGAGTGACTGGGAAGATTGGGA
GTCTGACGACTTCGATCCAGAACGCGTTAAGCTAACAGGCCCTTCTTACTCTCACGAATATTTTGCTGCTGCTTTTGAAG
CTTACATGAGCGTTGCAAAAGCAAACGGGCATGGTTTAGATGGCTACCAAGCGTTAACACGTGAAGAAATGCAAACCCAA
GATCCACAAGCGATTGATTGGATTGACGGTTTGTTCCACGACTACCTGCAATACACCGCAAGCATCGACTCTGCAGGCGT
CAAACTCTACACAGAAAAAACGAATCCAGGCTCGGTTCCTACCTTCCGCATGGCACCAAACAAACATGGTTTAGTAGAAG
CCTACACCTACAAGTCTCAATGGCTGACAAAAGTGAAGATCGTTGGCGACGACGCGATGAATGTCATCGGTAATGACCAA
GACAACACATTTGAAGGCAACCATAAAAACAACAGTATTTATGGTGAGGGAGGCGTCAACACTTACGTCGTGCGACACAA
ACTGGCTGAATGTATCGTTATCAAAGCGAAAAACGTCTCTGTTGAGTGCCCTAATACAGGCATTGACGAGTTGTACGACA
TTCAGAACATCCAGTTCACCGATCAAACTCTAGATGTAACCAAGCTATAA

Upstream 100 bases:

>100_bases
ACTTTGTACAGTAAGCCTAACTGCCTGCGGTGGTAGTGACTCAAATTCAAAGTCACCAACAACCACACTGCCACCCCAAC
CAGCTCCAACATTGAAAACC

Downstream 100 bases:

>100_bases
ACAATGAAAAACATGAAGAAACTTACTCTACTCGCTCCCCTATTCCTTGTTGGTTGTGGTGGCCTTGCTGTCATGGATCG
TACTGATGCAGTAAAAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MTIPSVVSKKFPAKLQVAADAGFTHYLEVSLSQDGNNASFHIIAMDDGANDEKIFRAAKIVQHLLTNQPNSKYGADKSSI
AKTLAERDATLMLTENDDQNDEMLTKIFVSELLRQDKLDDAIADSGLPQSFDTGSLENFIATMMVLNEDDMDTLIESIAL
TLMSSGDTPNWLMNSQSLMYRELTVEGDCHYMSNFADYCANLGEHADRDAAFEEILHLVQAQGIAPNASTSSLQKAIQAH
ALSIHNDIQSGKPTVWRPTQSDWEDWESDDFDPERVKLTGPSYSHEYFAAAFEAYMSVAKANGHGLDGYQALTREEMQTQ
DPQAIDWIDGLFHDYLQYTASIDSAGVKLYTEKTNPGSVPTFRMAPNKHGLVEAYTYKSQWLTKVKIVGDDAMNVIGNDQ
DNTFEGNHKNNSIYGEGGVNTYVVRHKLAECIVIKAKNVSVECPNTGIDELYDIQNIQFTDQTLDVTKL

Sequences:

>Translated_469_residues
MTIPSVVSKKFPAKLQVAADAGFTHYLEVSLSQDGNNASFHIIAMDDGANDEKIFRAAKIVQHLLTNQPNSKYGADKSSI
AKTLAERDATLMLTENDDQNDEMLTKIFVSELLRQDKLDDAIADSGLPQSFDTGSLENFIATMMVLNEDDMDTLIESIAL
TLMSSGDTPNWLMNSQSLMYRELTVEGDCHYMSNFADYCANLGEHADRDAAFEEILHLVQAQGIAPNASTSSLQKAIQAH
ALSIHNDIQSGKPTVWRPTQSDWEDWESDDFDPERVKLTGPSYSHEYFAAAFEAYMSVAKANGHGLDGYQALTREEMQTQ
DPQAIDWIDGLFHDYLQYTASIDSAGVKLYTEKTNPGSVPTFRMAPNKHGLVEAYTYKSQWLTKVKIVGDDAMNVIGNDQ
DNTFEGNHKNNSIYGEGGVNTYVVRHKLAECIVIKAKNVSVECPNTGIDELYDIQNIQFTDQTLDVTKL
>Mature_468_residues
TIPSVVSKKFPAKLQVAADAGFTHYLEVSLSQDGNNASFHIIAMDDGANDEKIFRAAKIVQHLLTNQPNSKYGADKSSIA
KTLAERDATLMLTENDDQNDEMLTKIFVSELLRQDKLDDAIADSGLPQSFDTGSLENFIATMMVLNEDDMDTLIESIALT
LMSSGDTPNWLMNSQSLMYRELTVEGDCHYMSNFADYCANLGEHADRDAAFEEILHLVQAQGIAPNASTSSLQKAIQAHA
LSIHNDIQSGKPTVWRPTQSDWEDWESDDFDPERVKLTGPSYSHEYFAAAFEAYMSVAKANGHGLDGYQALTREEMQTQD
PQAIDWIDGLFHDYLQYTASIDSAGVKLYTEKTNPGSVPTFRMAPNKHGLVEAYTYKSQWLTKVKIVGDDAMNVIGNDQD
NTFEGNHKNNSIYGEGGVNTYVVRHKLAECIVIKAKNVSVECPNTGIDELYDIQNIQFTDQTLDVTKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52090; Mature: 51959

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPSVVSKKFPAKLQVAADAGFTHYLEVSLSQDGNNASFHIIAMDDGANDEKIFRAAKI
CCCHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHH
VQHLLTNQPNSKYGADKSSIAKTLAERDATLMLTENDDQNDEMLTKIFVSELLRQDKLDD
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AIADSGLPQSFDTGSLENFIATMMVLNEDDMDTLIESIALTLMSSGDTPNWLMNSQSLMY
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCHHEE
RELTVEGDCHYMSNFADYCANLGEHADRDAAFEEILHLVQAQGIAPNASTSSLQKAIQAH
EEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ALSIHNDIQSGKPTVWRPTQSDWEDWESDDFDPERVKLTGPSYSHEYFAAAFEAYMSVAK
HHHHHHHHCCCCCCEECCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
ANGHGLDGYQALTREEMQTQDPQAIDWIDGLFHDYLQYTASIDSAGVKLYTEKTNPGSVP
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
TFRMAPNKHGLVEAYTYKSQWLTKVKIVGDDAMNVIGNDQDNTFEGNHKNNSIYGEGGVN
EEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEECCCCC
TYVVRHKLAECIVIKAKNVSVECPNTGIDELYDIQNIQFTDQTLDVTKL
HHHHHHHHHHEEEEEECCEEEECCCCCHHHHHHCCCCEECCCCCCEECC
>Mature Secondary Structure 
TIPSVVSKKFPAKLQVAADAGFTHYLEVSLSQDGNNASFHIIAMDDGANDEKIFRAAKI
CCHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHH
VQHLLTNQPNSKYGADKSSIAKTLAERDATLMLTENDDQNDEMLTKIFVSELLRQDKLDD
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AIADSGLPQSFDTGSLENFIATMMVLNEDDMDTLIESIALTLMSSGDTPNWLMNSQSLMY
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCHHEE
RELTVEGDCHYMSNFADYCANLGEHADRDAAFEEILHLVQAQGIAPNASTSSLQKAIQAH
EEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ALSIHNDIQSGKPTVWRPTQSDWEDWESDDFDPERVKLTGPSYSHEYFAAAFEAYMSVAK
HHHHHHHHCCCCCCEECCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
ANGHGLDGYQALTREEMQTQDPQAIDWIDGLFHDYLQYTASIDSAGVKLYTEKTNPGSVP
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
TFRMAPNKHGLVEAYTYKSQWLTKVKIVGDDAMNVIGNDQDNTFEGNHKNNSIYGEGGVN
EEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEECCCCC
TYVVRHKLAECIVIKAKNVSVECPNTGIDELYDIQNIQFTDQTLDVTKL
HHHHHHHHHHEEEEEECCEEEECCCCCHHHHHHCCCCEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA