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The map label for this gene is yedJ [H]

Identifier: 156976543

GI number: 156976543

Start: 549918

End: 550571

Strand: Reverse

Name: yedJ [H]

Synonym: VIBHAR_05316

Alternate gene names: 156976543

Gene position: 550571-549918 (Counterclockwise)

Preceding gene: 156976544

Following gene: 156976542

Centisome position: 24.98

GC content: 47.4

Gene sequence:

>654_bases
ATGCCTCAACTCAATAAGTCAGACCTCAGCAAATTTGAACCTCAGTTCCTTCAATTTATGCAGCAAGAAATGCAAACCGA
CGCGGCCCACGACCTGAGCCACGTCCGCCGCGTAGTGAAAACGGCTCGCCAGCTAGCAGAACAAGAAGGTGCGGATTTAG
CCGTTGTCCTGCCCGCAGCCTATCTGCACGATTGCTTCACTTATCCGAAAGACCACCCAAATCGCAAACAAAGCTCCACG
ATTGCAGCTACCAAGGCGATTTCGTTTCTAGAAAGCATCAACTACCCTGCTCAGTACCATGATGCCATCGCCCACGCGAT
CGAATCCCACAGCTTTAGTGCCAATATTACGCCAAACACTTTAGAAGCTCAGGTTGTCCAAGATGCCGATCGTTTAGATG
CGCTTGGCGCAATTGGTGTGACACGGTGCATTCAAGTGAGCACGTTATTTGATGCCGCCTTGTATAACGAACAGGACATG
TTTGCAGAGCATCGAGAATTGGAAGATAAACGCTTTACCATCGATCATTTCCAAACCAAACTGTTTAAAATTGTTGAAAC
AATGAACACCAAAGCAGCGTATGAAGAAGGTCGGAAACGTAAAGCATTTATGGAGTCTTACCTCGAACAGCTGCGCCAAG
AAGTAGAAGGTTAA

Upstream 100 bases:

>100_bases
ACGAGACTTTCTCGTAGCGTCTCAATAACAACGTCTCGTTTGGCAATTTAATAAAGGCTTAGGCATAATCTGTCTAAGTC
TTTATTTTTTCATTATTATT

Downstream 100 bases:

>100_bases
TATGTCGGAAAGCCACGACCTAATTACAGAGCTCAAACGCCAGCTCAAACTGTCTGATTTGCATTACGTCGATGTCGCAC
AGCATTTGGAGTTAAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPQLNKSDLSKFEPQFLQFMQQEMQTDAAHDLSHVRRVVKTARQLAEQEGADLAVVLPAAYLHDCFTYPKDHPNRKQSST
IAATKAISFLESINYPAQYHDAIAHAIESHSFSANITPNTLEAQVVQDADRLDALGAIGVTRCIQVSTLFDAALYNEQDM
FAEHRELEDKRFTIDHFQTKLFKIVETMNTKAAYEEGRKRKAFMESYLEQLRQEVEG

Sequences:

>Translated_217_residues
MPQLNKSDLSKFEPQFLQFMQQEMQTDAAHDLSHVRRVVKTARQLAEQEGADLAVVLPAAYLHDCFTYPKDHPNRKQSST
IAATKAISFLESINYPAQYHDAIAHAIESHSFSANITPNTLEAQVVQDADRLDALGAIGVTRCIQVSTLFDAALYNEQDM
FAEHRELEDKRFTIDHFQTKLFKIVETMNTKAAYEEGRKRKAFMESYLEQLRQEVEG
>Mature_216_residues
PQLNKSDLSKFEPQFLQFMQQEMQTDAAHDLSHVRRVVKTARQLAEQEGADLAVVLPAAYLHDCFTYPKDHPNRKQSSTI
AATKAISFLESINYPAQYHDAIAHAIESHSFSANITPNTLEAQVVQDADRLDALGAIGVTRCIQVSTLFDAALYNEQDMF
AEHRELEDKRFTIDHFQTKLFKIVETMNTKAAYEEGRKRKAFMESYLEQLRQEVEG

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=213, Percent_Identity=43.6619718309859, Blast_Score=180, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24754; Mature: 24623

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLNKSDLSKFEPQFLQFMQQEMQTDAAHDLSHVRRVVKTARQLAEQEGADLAVVLPAA
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YLHDCFTYPKDHPNRKQSSTIAATKAISFLESINYPAQYHDAIAHAIESHSFSANITPNT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCH
LEAQVVQDADRLDALGAIGVTRCIQVSTLFDAALYNEQDMFAEHRELEDKRFTIDHFQTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LFKIVETMNTKAAYEEGRKRKAFMESYLEQLRQEVEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQLNKSDLSKFEPQFLQFMQQEMQTDAAHDLSHVRRVVKTARQLAEQEGADLAVVLPAA
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YLHDCFTYPKDHPNRKQSSTIAATKAISFLESINYPAQYHDAIAHAIESHSFSANITPNT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCH
LEAQVVQDADRLDALGAIGVTRCIQVSTLFDAALYNEQDMFAEHRELEDKRFTIDHFQTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LFKIVETMNTKAAYEEGRKRKAFMESYLEQLRQEVEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]