Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976459

Identifier: 156976459

GI number: 156976459

Start: 486014

End: 486496

Strand: Direct

Name: 156976459

Synonym: VIBHAR_05232

Alternate gene names: NA

Gene position: 486014-486496 (Clockwise)

Preceding gene: 156976458

Following gene: 156976461

Centisome position: 22.05

GC content: 44.93

Gene sequence:

>483_bases
ATGGTCAGAATTGTGGTACTTAGTGCATGCGCGCTGCTTGTGGCTACACAGGCTAGTTCCGCTTGTAACTATTTGTCTGA
TCGATCCGTCGTATTTGCTGATAACACCATGACAGTTTGTGAAGATGTTTTTGATAGCGTGGGTGTTCTTAGCATGGACA
CACTTAACTGGTACATCGCTGAAAAGGCGATTGAAGGCCCAACAGAAAGTTACTGGGATCAATGGGCTATTCGCTCGGAA
GACACGCCGATACTCACTCAAAACCTAGAAAAAAACTACTTTGGTCTTGGGCTTTGGATGCCAGAAGACCTACGTGATGA
AGAAGCTAATATGAGCACCGAAGAGTGGTTAAAAAGTCATGGTTTGATGTTCAGTGTGGGCTTTGGCGATAAGCACGATG
GTGAACCAAGAATGCGCTTTGATTACCGTTGGCATGAATACTACGACGCTGACTGGATGATGCAAATCGAAGTTCCGTTT
TAA

Upstream 100 bases:

>100_bases
AAGACATCAGCGCATTCACGACCCCAACGGTTAATGAAATATTGATGAGCGAAGGCTTATATAAACAATCGTAATCTGAA
AACGAAGAGGTCAGGTTTTC

Downstream 100 bases:

>100_bases
GCCGAATCAAAACAAAAAGGACGCACATGAGTGCGTCCTTTTTTCGTTCTATTTATGCTGTATTTACAGTGCTTCCCCAA
ACACTAAGAAACACAGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MVRIVVLSACALLVATQASSACNYLSDRSVVFADNTMTVCEDVFDSVGVLSMDTLNWYIAEKAIEGPTESYWDQWAIRSE
DTPILTQNLEKNYFGLGLWMPEDLRDEEANMSTEEWLKSHGLMFSVGFGDKHDGEPRMRFDYRWHEYYDADWMMQIEVPF

Sequences:

>Translated_160_residues
MVRIVVLSACALLVATQASSACNYLSDRSVVFADNTMTVCEDVFDSVGVLSMDTLNWYIAEKAIEGPTESYWDQWAIRSE
DTPILTQNLEKNYFGLGLWMPEDLRDEEANMSTEEWLKSHGLMFSVGFGDKHDGEPRMRFDYRWHEYYDADWMMQIEVPF
>Mature_160_residues
MVRIVVLSACALLVATQASSACNYLSDRSVVFADNTMTVCEDVFDSVGVLSMDTLNWYIAEKAIEGPTESYWDQWAIRSE
DTPILTQNLEKNYFGLGLWMPEDLRDEEANMSTEEWLKSHGLMFSVGFGDKHDGEPRMRFDYRWHEYYDADWMMQIEVPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18535; Mature: 18535

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIVVLSACALLVATQASSACNYLSDRSVVFADNTMTVCEDVFDSVGVLSMDTLNWYIA
CEEEEEEHHHHHHHHHCCHHHHHHCCCCEEEEECCCHHHHHHHHHHCCEEEECHHHHEEE
EKAIEGPTESYWDQWAIRSEDTPILTQNLEKNYFGLGLWMPEDLRDEEANMSTEEWLKSH
HHHCCCCCHHHHHHEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHC
GLMFSVGFGDKHDGEPRMRFDYRWHEYYDADWMMQIEVPF
CCEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECC
>Mature Secondary Structure
MVRIVVLSACALLVATQASSACNYLSDRSVVFADNTMTVCEDVFDSVGVLSMDTLNWYIA
CEEEEEEHHHHHHHHHCCHHHHHHCCCCEEEEECCCHHHHHHHHHHCCEEEECHHHHEEE
EKAIEGPTESYWDQWAIRSEDTPILTQNLEKNYFGLGLWMPEDLRDEEANMSTEEWLKSH
HHHCCCCCHHHHHHEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHC
GLMFSVGFGDKHDGEPRMRFDYRWHEYYDADWMMQIEVPF
CCEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA