Click here to switch to the map view.

The map label for this gene is 156976436

Identifier: 156976436

GI number: 156976436

Start: 465477

End: 467021

Strand: Reverse

Name: 156976436

Synonym: VIBHAR_05209

Alternate gene names: NA

Gene position: 467021-465477 (Counterclockwise)

Preceding gene: 156976437

Following gene: 156976434

Centisome position: 21.19

GC content: 48.48

Gene sequence:

>1545_bases
ATGAAAAAAACGCCAGTTATCAACCCAGAAAGCCAAGATGTTGCCAAGCTACAAGCGATGGTGAAAGCCCTTCTGCTCTC
TCAGGAGCGGAAGGAGTCTCAATGGAAACAAGAGCGTCAATCCTTACTCGAACAGCTCAAGCTGGCCTTCGACCGTCAGT
TCGCGAAACGCTCCGAGGCGCTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTCAACGAAGTGGAATGTGAAGCCGCT
AAGGAAGAAGAGGTTGAAGTGGTCACGACGACCACTACAACGAAGAAGCGTGGTAAACGCAAGCCCCTTCCAAAGACTTT
GCCTCGTGAGGTTATCGAACTCGATTTAGACGACCATGAAAAACAGTGTGCATGCTGCCAACATAGTCTGCATAAAATCG
GTGAAGACCGCAGTGAGAAACTTGAGTTCTCACCAGCTGTGCTCAAAGTGCTGGAATATGTTCGTCCTAAGTATGCTTGT
CGTCAGTGCGAGCAAACTGAAGACAACAGCCACATCGTTCAAAAACCAGCGCCCCAGAGCATCATCCCTAAAAGCTTCGC
GACAGAAAGCTTGCTGGCCAATATCATCCTTGGTAAATATCAATACGCAATGCCCCTTTACCGCCAAGAGTCGCTGTTTA
CTCAGTCGGGTATTGAGCTATCGCGAACTACCATGGCAAGGTGGGTTATCCAAGTCAGTGAGAAGTTCAAACCCCTCTAT
GCCGCCTTAAAAGAGCATCTACTTCAACAAGTGGTGGTTCAGGCGGATGAAACGCCGCTCAATGTCCTTAAAGAAGATAA
AAAGTGTTATATGTGGCTCTACTGCTCGGGCGCAGACTCGCCCGACGCTGCACTGCCGAATGTAAAGAATATCGCCTTGT
ACGACTATCAAAACAGTCGCGCGAGGGTATGCCCTGTTGCCTTCTTGGGGGATTACAGTGGTTATCTGCAAACCGATGGC
TATGGTGCCTATGATGGTCTTCATCACGTAACCAATGTGGGTTGCTTGGCGCATGCACGGCGTAAGTTCATGGATGCTAA
GAAGCTTCAAGGTAAAGGTAAGTCAGGCAAAGCAGATAAAGCGCTGGCCAAAATCCAGAAGCTCTATGGGATAGAATCGC
GCTTAAAAGGTGCGACTGTCGAAACACGAAAAGCAGAACGTCAACAGCATGCCAAGCCGATACTGGATGAGCTGCACGAC
TGGATGACGTCTCAACAAGTAATAAGCTCTAGTCCATTAGGAAAAGCGATTAAGTATACGCTCGGCCAATGGCCCAAGCT
CATCCGCTATATCGATGACGGTCATTTATCTATCGATAATAATCGTGCTGAACGCGCCATTAAACCGCTGGTCATTGGCA
GAAAAAATTGGCTGTTCTCAAACACACCAAATGGTGCTGATGCGAGCGCGATGCTTTACAGCATCGTCGAGACAGCGAAA
GCCAACGGCCTTATCCTCTACGACTACATGGTCAAGTGCATGAAAGAGCTCGCGAAAGCTGAGCCTGATATCGATGCGCT
CCTACCTTGGAACTTCAAACATTAA

Upstream 100 bases:

>100_bases
GCCATAAACCCGTTCAAATAAACGATTTTACAATGACTTAATTGATAATAAAGCCTTATCTACCAAGCGTGAATGGCATG
ATTTTAGTATAATAAATGCC

Downstream 100 bases:

>100_bases
CAACACCGCCCCGTGGGTTCATGGGGCGCATACGTTGTTTCAATCACTTTATCCTGAACAGTTCGTATCCAGCCATGAGA
TATTTTTGTTGATAATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAA
KEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYAC
RQCEQTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLY
AALKEHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDG
YGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHD
WMTSQQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH

Sequences:

>Translated_514_residues
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAA
KEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYAC
RQCEQTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLY
AALKEHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDG
YGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHD
WMTSQQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
>Mature_514_residues
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAA
KEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYAC
RQCEQTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLY
AALKEHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDG
YGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHD
WMTSQQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 58352; Mature: 58352

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKPYDESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHE
CCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCH
KQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQS
HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEECCCCCCCC
IIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLY
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AALKEHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
ARVCPVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADK
CEEEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTSQQVISSSPLGKAIKYT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHC
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
CCCEEEHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKPYDESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHE
CCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCH
KQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQS
HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEECCCCCCCC
IIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLY
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AALKEHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
ARVCPVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADK
CEEEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALAKIQKLYGIESRLKGATVETRKAERQQHAKPILDELHDWMTSQQVISSSPLGKAIKYT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHC
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
CCCEEEHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]