Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976406

Identifier: 156976406

GI number: 156976406

Start: 435438

End: 436094

Strand: Direct

Name: 156976406

Synonym: VIBHAR_05179

Alternate gene names: NA

Gene position: 435438-436094 (Clockwise)

Preceding gene: 156976405

Following gene: 156976407

Centisome position: 19.76

GC content: 44.75

Gene sequence:

>657_bases
ATGAAAAATATAAAAGTTGCAGTCGCCTTCATCGCTGGTATTAGCCTACAAGCTCATGCCAACAACTCAGTTGATATCAC
CAGTAGCACGCCTGAGGGAGTGCATACAAAGTTTGAATCTGCTCATCAAGTCCGTGATCGCATGGCGTCGTCTGGTTTTA
CGCTGCATCGTTGTGGTATCCAGTCTATCAAGAAAGGCCACATGGCTGATCAAGATATGGAAACCCCACACAGCCAGATT
ACTTGTATGTACTCAAAACCTGGTGCGCAAGTTACGGATGAATCCGAAATTGCTTATTGGCACTTAAACGTCGTTTACGA
TATGAGCAGCCAAATGTACAAAGCGGGCAATGAGTTTACCGATATCTATCAGACTCATATCTACACGCTAACACCGAGCT
ACCTTCTAGACGCTGCTCCTAACTTTCATCAGCAAAGAGCAAGTCTTCAGTCATCTGGTAAGAGGGTGGGTGAATGTGAG
TTGCAGCAAATTTACTACTTTATGAAGCCGACAGAGGCAACGTACCTTTCGCATGTTGCAACTTGCCCAGTTTATGCCGC
AGAAGGTGAACTATCAGGTCACCTGAATGTTGCTATCGACTACAACTCTGAAAGAAAAGGCTATACGGAAGCTAGTGTTG
GCTTTGAATCTCTTTAG

Upstream 100 bases:

>100_bases
TATGGATCTAATATCACAAATTTCTATATTAAAGTTGTTTCATATTTGTTTGGTGAGTTAGTTTCCGTCTCGAATCTAAC
GAGGAGAATAGAACATTACT

Downstream 100 bases:

>100_bases
TCTTTTATATTAGTCAGTATTCAACCTTTCGCTTTATGCACCAGTTGATGACTGGTGCATTTTTAACTTTGCTGAGACTC
TCTGGCAGCTTTGTGTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKNIKVAVAFIAGISLQAHANNSVDITSSTPEGVHTKFESAHQVRDRMASSGFTLHRCGIQSIKKGHMADQDMETPHSQI
TCMYSKPGAQVTDESEIAYWHLNVVYDMSSQMYKAGNEFTDIYQTHIYTLTPSYLLDAAPNFHQQRASLQSSGKRVGECE
LQQIYYFMKPTEATYLSHVATCPVYAAEGELSGHLNVAIDYNSERKGYTEASVGFESL

Sequences:

>Translated_218_residues
MKNIKVAVAFIAGISLQAHANNSVDITSSTPEGVHTKFESAHQVRDRMASSGFTLHRCGIQSIKKGHMADQDMETPHSQI
TCMYSKPGAQVTDESEIAYWHLNVVYDMSSQMYKAGNEFTDIYQTHIYTLTPSYLLDAAPNFHQQRASLQSSGKRVGECE
LQQIYYFMKPTEATYLSHVATCPVYAAEGELSGHLNVAIDYNSERKGYTEASVGFESL
>Mature_218_residues
MKNIKVAVAFIAGISLQAHANNSVDITSSTPEGVHTKFESAHQVRDRMASSGFTLHRCGIQSIKKGHMADQDMETPHSQI
TCMYSKPGAQVTDESEIAYWHLNVVYDMSSQMYKAGNEFTDIYQTHIYTLTPSYLLDAAPNFHQQRASLQSSGKRVGECE
LQQIYYFMKPTEATYLSHVATCPVYAAEGELSGHLNVAIDYNSERKGYTEASVGFESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24247; Mature: 24247

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKVAVAFIAGISLQAHANNSVDITSSTPEGVHTKFESAHQVRDRMASSGFTLHRCGI
CCCEEEEEEEEECCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCH
QSIKKGHMADQDMETPHSQITCMYSKPGAQVTDESEIAYWHLNVVYDMSSQMYKAGNEFT
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCHHHHHHCCCHHH
DIYQTHIYTLTPSYLLDAAPNFHQQRASLQSSGKRVGECELQQIYYFMKPTEATYLSHVA
HHHHHEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHH
TCPVYAAEGELSGHLNVAIDYNSERKGYTEASVGFESL
HCCEEEECCCCCCEEEEEEEECCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKNIKVAVAFIAGISLQAHANNSVDITSSTPEGVHTKFESAHQVRDRMASSGFTLHRCGI
CCCEEEEEEEEECCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCH
QSIKKGHMADQDMETPHSQITCMYSKPGAQVTDESEIAYWHLNVVYDMSSQMYKAGNEFT
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCHHHHHHCCCHHH
DIYQTHIYTLTPSYLLDAAPNFHQQRASLQSSGKRVGECELQQIYYFMKPTEATYLSHVA
HHHHHEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHH
TCPVYAAEGELSGHLNVAIDYNSERKGYTEASVGFESL
HCCEEEECCCCCCEEEEEEEECCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA