Click here to switch to the map view.

The map label for this gene is 156976370

Identifier: 156976370

GI number: 156976370

Start: 383947

End: 385752

Strand: Reverse

Name: 156976370

Synonym: VIBHAR_05143

Alternate gene names: NA

Gene position: 385752-383947 (Counterclockwise)

Preceding gene: 156976371

Following gene: 156976369

Centisome position: 17.5

GC content: 47.51

Gene sequence:

>1806_bases
ATGGCTGAGTTTACTTTCCTAAATCCGTATTGTTTGTTGGGTTTGCTCGTCATCCCTGTCGTCCTTGCCCTTAACAGCCA
ATATAGAACCAAAAAGTCATCGTTGATTGCGCCTCATTTGGCAAAAATGCTTGGTCATTCAGTAAAAACCAAGCACTACT
TCGCCATTTGGGGGTTAGCATGGGCAATCGCTTGTATCGCTTTAGCAAGCCCAAGTTGGCAATCCAACACACGCCCAAGC
TTTGAACTAAGCCAAAACCGAGTGTTAGTTCTGGATATGTCGCGCTCTATGTACGCAACGGATGTGAAGCCAAATCGCCT
GTCACAAACCCGCTATAAAGCGTCGGATTTACTGCCGAAATGGAAAGAAGGCTCAACAGGTTTGGTCGCGTACGCGGGCG
ATGCTTATACGTTAAGTCCACTGACGACTGACTCCAGCACACTCGCTGGCATCATCGAAAACTTGTCTCCTGAGTTAATG
CCGTATCAAGGCTCCAACTTACCATCAGCGATTGAAACCGCGCTTGGTCAGTTTACTCAAGCGGGCGTCAATCAAGGTGA
CATCGTCGTACTAGCAGATGATTTGGATGACTCCGAACTATCTCGCTCATTAGCGTTAGTAAACGGTAAAGACATTCGTG
TGTCAGTACTCGCTATCGGTACATCAACTGGCGCACCAATTGCTCTTCCGGATGGTTCGTTAATGAAGAGCCGACAAGGC
AACACAGTGGTAGCGAAGACTAACCTGAAAAACTTACAGAAGTTAGCCAAAGAGACCGGCGGATTATTTGTTCCAATTCA
ACACAATAACCGTGATGTCGAGAACATTGCCGCGTTTACTAATAACGCGAGTAACAACCTTGCCGCCAAGCAAAGTGAAG
ACGTGAAAACCGACTCTCGCTTGAACGGTGGTTTCTGGTTGCTACCTCTGCTGTTGATTCCTGCAGCACTACTCTTCCGT
CGAGGCATGATTTGGTTACTGGTAGCGGCCGTCTTACCGATGAGTTGGACACCGAAAGCAGAAGCCAATGCGTTTTTGAA
TCAAAACCAACAAGGCGAAGAGCTTTATCAACAAGGTGAATACGAAAAAGCGCAAAGTACCTTTACCGACCCTAATTGGA
AAGGCGCAGCAAGCTACCAAGCTGGGGATTACGAAAGTGCGATCGAAGCATTCTCCAATAATCCAAGCCTTGATGGCCGC
TATAACTTGACAACTGCACTTGCTAAGAACGGTCAGCTTGAGGATGCGGCGGAGCTCTATAAAAACGTAATTCAAGAAAA
GCCTGACTTTGAAGCTGCGAAAAAGAACCTGTCGGTTGTAGAGGAGAAACTGAAGCAACAGCAGCAGCAACAGCAGCAGC
AGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAA
CAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAAAAGTCTCAGAGTGATGCTAAACA
AGAGCAAGGGCAGCAGTCACAAAACCAGCAAGAACCTGAAAATAAAAAAGAAAATCAGAAAGCTGAGCGACAAAAAGCCA
AGCAAGAAGAAGAGAAACAAGGCGAGCAAAAAGGCGAACCTATGCAGGCTCAAGCTCAGCCAGAGAAAACGCCTCGGGAT
GATCCTGAGTTCCGTCGCTTAGAAGCGGTAGAAAGCGCGCGTGATCCTAGTTTCTTGATTCGAGCTCAAATGCAGCTTCA
AGCGCAACAAAAACAGCGTCCACAACAATCAAATAAGGAGTGGTAA

Upstream 100 bases:

>100_bases
AGCGATACGCAAACATGGCGTCCTCAGTCGGAATGGTTCCCTTACCCACTAGGCGCTGCACTTGTGCTTTCCGTGTTCCT
GTTTGTTCTAAGGAGAAAAC

Downstream 100 bases:

>100_bases
GTCCATGATGAAAAAAGGCGCCAAACTGGTCTTTGTTCTTATGGCCAGCCTACTGACCAGCTTTTCGGTTTTCGCACAAA
GCCTACAAGCTAGTGTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Von Willebrand Factor Type A Domain-Containing Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MAEFTFLNPYCLLGLLVIPVVLALNSQYRTKKSSLIAPHLAKMLGHSVKTKHYFAIWGLAWAIACIALASPSWQSNTRPS
FELSQNRVLVLDMSRSMYATDVKPNRLSQTRYKASDLLPKWKEGSTGLVAYAGDAYTLSPLTTDSSTLAGIIENLSPELM
PYQGSNLPSAIETALGQFTQAGVNQGDIVVLADDLDDSELSRSLALVNGKDIRVSVLAIGTSTGAPIALPDGSLMKSRQG
NTVVAKTNLKNLQKLAKETGGLFVPIQHNNRDVENIAAFTNNASNNLAAKQSEDVKTDSRLNGGFWLLPLLLIPAALLFR
RGMIWLLVAAVLPMSWTPKAEANAFLNQNQQGEELYQQGEYEKAQSTFTDPNWKGAASYQAGDYESAIEAFSNNPSLDGR
YNLTTALAKNGQLEDAAELYKNVIQEKPDFEAAKKNLSVVEEKLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQKSQSDAKQEQGQQSQNQQEPENKKENQKAERQKAKQEEEKQGEQKGEPMQAQAQPEKTPRD
DPEFRRLEAVESARDPSFLIRAQMQLQAQQKQRPQQSNKEW

Sequences:

>Translated_601_residues
MAEFTFLNPYCLLGLLVIPVVLALNSQYRTKKSSLIAPHLAKMLGHSVKTKHYFAIWGLAWAIACIALASPSWQSNTRPS
FELSQNRVLVLDMSRSMYATDVKPNRLSQTRYKASDLLPKWKEGSTGLVAYAGDAYTLSPLTTDSSTLAGIIENLSPELM
PYQGSNLPSAIETALGQFTQAGVNQGDIVVLADDLDDSELSRSLALVNGKDIRVSVLAIGTSTGAPIALPDGSLMKSRQG
NTVVAKTNLKNLQKLAKETGGLFVPIQHNNRDVENIAAFTNNASNNLAAKQSEDVKTDSRLNGGFWLLPLLLIPAALLFR
RGMIWLLVAAVLPMSWTPKAEANAFLNQNQQGEELYQQGEYEKAQSTFTDPNWKGAASYQAGDYESAIEAFSNNPSLDGR
YNLTTALAKNGQLEDAAELYKNVIQEKPDFEAAKKNLSVVEEKLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQKSQSDAKQEQGQQSQNQQEPENKKENQKAERQKAKQEEEKQGEQKGEPMQAQAQPEKTPRD
DPEFRRLEAVESARDPSFLIRAQMQLQAQQKQRPQQSNKEW
>Mature_600_residues
AEFTFLNPYCLLGLLVIPVVLALNSQYRTKKSSLIAPHLAKMLGHSVKTKHYFAIWGLAWAIACIALASPSWQSNTRPSF
ELSQNRVLVLDMSRSMYATDVKPNRLSQTRYKASDLLPKWKEGSTGLVAYAGDAYTLSPLTTDSSTLAGIIENLSPELMP
YQGSNLPSAIETALGQFTQAGVNQGDIVVLADDLDDSELSRSLALVNGKDIRVSVLAIGTSTGAPIALPDGSLMKSRQGN
TVVAKTNLKNLQKLAKETGGLFVPIQHNNRDVENIAAFTNNASNNLAAKQSEDVKTDSRLNGGFWLLPLLLIPAALLFRR
GMIWLLVAAVLPMSWTPKAEANAFLNQNQQGEELYQQGEYEKAQSTFTDPNWKGAASYQAGDYESAIEAFSNNPSLDGRY
NLTTALAKNGQLEDAAELYKNVIQEKPDFEAAKKNLSVVEEKLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQKSQSDAKQEQGQQSQNQQEPENKKENQKAERQKAKQEEEKQGEQKGEPMQAQAQPEKTPRDD
PEFRRLEAVESARDPSFLIRAQMQLQAQQKQRPQQSNKEW

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67407; Mature: 67276

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50293 TPR_REGION ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFTFLNPYCLLGLLVIPVVLALNSQYRTKKSSLIAPHLAKMLGHSVKTKHYFAIWGLA
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHH
WAIACIALASPSWQSNTRPSFELSQNRVLVLDMSRSMYATDVKPNRLSQTRYKASDLLPK
HHHHHHHHCCCCCCCCCCCCCEECCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCC
WKEGSTGLVAYAGDAYTLSPLTTDSSTLAGIIENLSPELMPYQGSNLPSAIETALGQFTQ
CCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
AGVNQGDIVVLADDLDDSELSRSLALVNGKDIRVSVLAIGTSTGAPIALPDGSLMKSRQG
HCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCHHHHCCCC
NTVVAKTNLKNLQKLAKETGGLFVPIQHNNRDVENIAAFTNNASNNLAAKQSEDVKTDSR
CEEEEECCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LNGGFWLLPLLLIPAALLFRRGMIWLLVAAVLPMSWTPKAEANAFLNQNQQGEELYQQGE
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCC
YEKAQSTFTDPNWKGAASYQAGDYESAIEAFSNNPSLDGRYNLTTALAKNGQLEDAAELY
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHH
KNVIQEKPDFEAAKKNLSVVEEKLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQQQQQQQQQQQQQQQQQKSQSDAKQEQGQQSQNQQEPENKKENQKAERQKAKQEEEKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GEQKGEPMQAQAQPEKTPRDDPEFRRLEAVESARDPSFLIRAQMQLQAQQKQRPQQSNKE
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
W
C
>Mature Secondary Structure 
AEFTFLNPYCLLGLLVIPVVLALNSQYRTKKSSLIAPHLAKMLGHSVKTKHYFAIWGLA
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHH
WAIACIALASPSWQSNTRPSFELSQNRVLVLDMSRSMYATDVKPNRLSQTRYKASDLLPK
HHHHHHHHCCCCCCCCCCCCCEECCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCC
WKEGSTGLVAYAGDAYTLSPLTTDSSTLAGIIENLSPELMPYQGSNLPSAIETALGQFTQ
CCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
AGVNQGDIVVLADDLDDSELSRSLALVNGKDIRVSVLAIGTSTGAPIALPDGSLMKSRQG
HCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCHHHHCCCC
NTVVAKTNLKNLQKLAKETGGLFVPIQHNNRDVENIAAFTNNASNNLAAKQSEDVKTDSR
CEEEEECCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LNGGFWLLPLLLIPAALLFRRGMIWLLVAAVLPMSWTPKAEANAFLNQNQQGEELYQQGE
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCC
YEKAQSTFTDPNWKGAASYQAGDYESAIEAFSNNPSLDGRYNLTTALAKNGQLEDAAELY
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHH
KNVIQEKPDFEAAKKNLSVVEEKLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQQQQQQQQQQQQQQQQQKSQSDAKQEQGQQSQNQQEPENKKENQKAERQKAKQEEEKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GEQKGEPMQAQAQPEKTPRDDPEFRRLEAVESARDPSFLIRAQMQLQAQQKQRPQQSNKE
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA