| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976322
Identifier: 156976322
GI number: 156976322
Start: 332193
End: 332696
Strand: Reverse
Name: 156976322
Synonym: VIBHAR_05095
Alternate gene names: NA
Gene position: 332696-332193 (Counterclockwise)
Preceding gene: 156976327
Following gene: 156976321
Centisome position: 15.09
GC content: 47.02
Gene sequence:
>504_bases ATGAAGATGAATATTGAGCAATGCTGGATGCGCTACTTAAAAGCAGAACAGCTGATGGAACAAGGCCATTGGCCAGAAGC TCATCGCTTGTATGAAGATGTTCTCAGCCATTTGCCAAATCACATTCACTCCGCACTCGAAAACGACCTTACCAAGCCAT GCCAGTTTGTATGTCTCATCAGCGGTTTGCGCGATGCCAGCGTAGCCCAATCTGAAATTCTCAATAAACTTGGAATGCAG CAGGAGGCGTTTTCAGCCCTTAACCAATCGTACGCTCTGTTCCAGTTCTTACAACTCGAAAGCCATGATTTGATTGGCCG AGTTAGCCAGTTATTGAGTAAGCAAAGTGAAGATTTACTCGCGCACATGGCCGCATTTTGCTCGGCGCAGCGCAATGCTC AGTGGATGATCGAACTCGACCATGTCACTCGTGCTCATGAGCAATTCTTGTATCTGCAAGCAATGACTGCAGCAGAAGCT GGGACGTCTCATTTGTATAACTAG
Upstream 100 bases:
>100_bases ATTTTACGAACAGCTCTACGCCATTTAAAATGAAAACAAGTCGCACTTGCAATTGATAATTAATTTCATTTAATATCTGT TCAAATCGAATTTTGTGGAG
Downstream 100 bases:
>100_bases GCAGGGATAACCCGGTATAGGTTTCTGCCAACGTGAAAGGCAGTAACAGTAATAACAACTCGATACACAAGGAAACGTGA TGTCCACACAAACCATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKMNIEQCWMRYLKAEQLMEQGHWPEAHRLYEDVLSHLPNHIHSALENDLTKPCQFVCLISGLRDASVAQSEILNKLGMQ QEAFSALNQSYALFQFLQLESHDLIGRVSQLLSKQSEDLLAHMAAFCSAQRNAQWMIELDHVTRAHEQFLYLQAMTAAEA GTSHLYN
Sequences:
>Translated_167_residues MKMNIEQCWMRYLKAEQLMEQGHWPEAHRLYEDVLSHLPNHIHSALENDLTKPCQFVCLISGLRDASVAQSEILNKLGMQ QEAFSALNQSYALFQFLQLESHDLIGRVSQLLSKQSEDLLAHMAAFCSAQRNAQWMIELDHVTRAHEQFLYLQAMTAAEA GTSHLYN >Mature_167_residues MKMNIEQCWMRYLKAEQLMEQGHWPEAHRLYEDVLSHLPNHIHSALENDLTKPCQFVCLISGLRDASVAQSEILNKLGMQ QEAFSALNQSYALFQFLQLESHDLIGRVSQLLSKQSEDLLAHMAAFCSAQRNAQWMIELDHVTRAHEQFLYLQAMTAAEA GTSHLYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19188; Mature: 19188
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNIEQCWMRYLKAEQLMEQGHWPEAHRLYEDVLSHLPNHIHSALENDLTKPCQFVCLI CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLRDASVAQSEILNKLGMQQEAFSALNQSYALFQFLQLESHDLIGRVSQLLSKQSEDLL HCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHMAAFCSAQRNAQWMIELDHVTRAHEQFLYLQAMTAAEAGTSHLYN HHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MKMNIEQCWMRYLKAEQLMEQGHWPEAHRLYEDVLSHLPNHIHSALENDLTKPCQFVCLI CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLRDASVAQSEILNKLGMQQEAFSALNQSYALFQFLQLESHDLIGRVSQLLSKQSEDLL HCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHMAAFCSAQRNAQWMIELDHVTRAHEQFLYLQAMTAAEAGTSHLYN HHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA