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The map label for this gene is fhiA [H]

Identifier: 156976192

GI number: 156976192

Start: 219024

End: 221114

Strand: Reverse

Name: fhiA [H]

Synonym: VIBHAR_04963

Alternate gene names: 156976192

Gene position: 221114-219024 (Counterclockwise)

Preceding gene: 156976193

Following gene: 156976191

Centisome position: 10.03

GC content: 48.97

Gene sequence:

>2091_bases
ATGTTTAACCGGTTAAAACACCTTCAAACTTCCACTAAAGGCTACATTGGTATTCCAATCGTCTTGTTGATGGTATTGGC
AATGGTCATCTTACCTTTGCCACCATTGCTATTGGACGCGCTGTTCACCTTCAATATCGTGTTAGCGATCTTGGTATTGC
TGGTCAGCACCACAGCGAAGCGACCACTCGACATTTCGATTTTCCCAACCATTTTGTTGGTCGCAACCTTACTTCGCCTC
ACTCTAAACGTTGCTTCAACGCGTATCGTATTACTTGAAGGTCACAACGGCAGCGATGCTGCAGGTAAGGTGATTCAAGC
CTTCGGTGAAGTGGTGATCGGCGGTAACTACGTGGTCGGTATGGTGGTGTTCATCATCTTGATGATCATTAACTTTGTCG
TGATCACCAAAGGTGGCGAACGTATTTCTGAAGTGTCGGCACGCTTTACCTTGGATGCACTACCGGGCAAACAAATGGCC
ATCGATGCCGACTTAAATGCAGGCTTGATTGACCAAGAAACCGCGCGCCAACGCCGCAAAGAGGTGGCGAACGAAGCGGA
CTTCCACGGTTCCATGGATGGTGCATCCAAGTTTGTGCGTGGTGATGCGGTTGCTGGTTTGCTGATCCTGTTCATCAACA
TCATTGGTGGTATCAGCATTGGTGTATTCGAGCACGGATTGCCTGCATCAGAAGCCTTCAAGACTTATGCCCTGCTGACC
ATTGGTGACGGACTAGTTGCTCAAATTCCATCACTGCTACTTGCTACCGCTGCAGCCATTATCGTCACGCGTATTAACGA
CAGCGATAACGGTATGTCGGAAACCATGCACAAGCAGCTGCTTGCAACACCAGCTACCTTGTATACCGTCGCCGCTATCA
TGGCGATCATTGGTATGGTTCCAGGAATGCCTCACCTTGCGTTCTTCACCTTTGCCGCGGTGCTCGCATTTGCGGGTTGG
CGACAAAGCAAAAAGCCAGTGCAAGATACACAAATCGACCAAGTAGAAGCCCTATCTCATGCCATGCAGGAAGAAGAAAC
CGCACTCACTTGGGACGATATTCCTCATGTCCACACGTTGTCTTTAGCGTTAGGCTACCGCTTGGTGCACTTGGTAAACA
AAGAGCAAGGCGCGCCTCTAGCGCAGCGTATTCGTGGTGTTCGCCGCAATCTCTCTGAACAAGTGGGTTTTCTACTGCCG
GAAGTGCGTATTCGCGACAATCTCAGTTTAAAGCCGAACCAATACACCATTGCTTTGAACGGCGAAGTGATTGAGCAAGG
CTTTATCGAGCCAGAACGTTTGATGGCGATTGCCGTGGGTGAAACCTATGGCGAAGTAGATGGGATTCTTGGTAGCGACC
CCGCCTACCAATTGCCTGCGGTTTGGATAGAGCATCAAGACAAAGCGAAAGCGCTGAACATGGGCTACCAAGTGGTTGAC
GATGGCACGGTTATCGCCACACACATCAGCAAAATCATGAAAACTAACTTGGCTGAATTGTTTACTCATGACGATGTTGA
AGCCATGACTCAACGTCTGACAGCGCAAGCACCAAAATTGGCCGAAGCCTTAGCAGCGGCTCTAACACCAGCGCAGCAGC
TTAAGGTTTACCGTCAGCTCCTGCTCGACCAAGTGCCGTTGAAAGACATTCGAACCATCGCTAATACCATGTTGGAATCT
TCGGAAAACACCAAAGATCCGATTTTACTCGCGGCAGATGTTCGCTGTGCACTCAAGCGAACCTTAGTTAACTTAGTCGC
TGGGCAGAAAAACGAACTGAACGTCTACGCCTTGTCTGATGAACTTGAACAGATGCTGATGACGTCGTTGCAACAAGCAC
AAGCCGCAGGCGCTGTCATGCTCGATAGCTTCCCTATTGAGCCAAACATTCTTAGCCAATTCCAACAGAACTTGCCTTTA
ATTCGTCAGCAATTGAAGCAACAAGGGCTGCCGCCAATTTTGTTGGTTATGCCGCAATTGCGCCCGTTATTGGCACGCTA
TGCACGTACCTTTACCCAAGGATTGGCGGTACTGTCTTACAATGAAATTCCAGAAAATAAACAGATCAACGTGGTAGGAA
ACCTTGGTTAA

Upstream 100 bases:

>100_bases
CGTCAAGGGGACGGAAAGGAACCGAAGCCTTTGCCTCATTTTTCAATTCCAAAGCATTTGCAACACTGATTAACCCGCGT
TTACCCAAGGACACCAGAGT

Downstream 100 bases:

>100_bases
TCTCATCTCAAATAAAGCGATGTATGACTACTTGTGCAATCTCGCACTGCAACACATTGTCACGGACGACGACCAACTGG
TGTTTGATGCGCTCAAACAC

Product: flagellar biosynthesis pathway, component FlhA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 696; Mature: 696

Protein sequence:

>696_residues
MFNRLKHLQTSTKGYIGIPIVLLMVLAMVILPLPPLLLDALFTFNIVLAILVLLVSTTAKRPLDISIFPTILLVATLLRL
TLNVASTRIVLLEGHNGSDAAGKVIQAFGEVVIGGNYVVGMVVFIILMIINFVVITKGGERISEVSARFTLDALPGKQMA
IDADLNAGLIDQETARQRRKEVANEADFHGSMDGASKFVRGDAVAGLLILFINIIGGISIGVFEHGLPASEAFKTYALLT
IGDGLVAQIPSLLLATAAAIIVTRINDSDNGMSETMHKQLLATPATLYTVAAIMAIIGMVPGMPHLAFFTFAAVLAFAGW
RQSKKPVQDTQIDQVEALSHAMQEEETALTWDDIPHVHTLSLALGYRLVHLVNKEQGAPLAQRIRGVRRNLSEQVGFLLP
EVRIRDNLSLKPNQYTIALNGEVIEQGFIEPERLMAIAVGETYGEVDGILGSDPAYQLPAVWIEHQDKAKALNMGYQVVD
DGTVIATHISKIMKTNLAELFTHDDVEAMTQRLTAQAPKLAEALAAALTPAQQLKVYRQLLLDQVPLKDIRTIANTMLES
SENTKDPILLAADVRCALKRTLVNLVAGQKNELNVYALSDELEQMLMTSLQQAQAAGAVMLDSFPIEPNILSQFQQNLPL
IRQQLKQQGLPPILLVMPQLRPLLARYARTFTQGLAVLSYNEIPENKQINVVGNLG

Sequences:

>Translated_696_residues
MFNRLKHLQTSTKGYIGIPIVLLMVLAMVILPLPPLLLDALFTFNIVLAILVLLVSTTAKRPLDISIFPTILLVATLLRL
TLNVASTRIVLLEGHNGSDAAGKVIQAFGEVVIGGNYVVGMVVFIILMIINFVVITKGGERISEVSARFTLDALPGKQMA
IDADLNAGLIDQETARQRRKEVANEADFHGSMDGASKFVRGDAVAGLLILFINIIGGISIGVFEHGLPASEAFKTYALLT
IGDGLVAQIPSLLLATAAAIIVTRINDSDNGMSETMHKQLLATPATLYTVAAIMAIIGMVPGMPHLAFFTFAAVLAFAGW
RQSKKPVQDTQIDQVEALSHAMQEEETALTWDDIPHVHTLSLALGYRLVHLVNKEQGAPLAQRIRGVRRNLSEQVGFLLP
EVRIRDNLSLKPNQYTIALNGEVIEQGFIEPERLMAIAVGETYGEVDGILGSDPAYQLPAVWIEHQDKAKALNMGYQVVD
DGTVIATHISKIMKTNLAELFTHDDVEAMTQRLTAQAPKLAEALAAALTPAQQLKVYRQLLLDQVPLKDIRTIANTMLES
SENTKDPILLAADVRCALKRTLVNLVAGQKNELNVYALSDELEQMLMTSLQQAQAAGAVMLDSFPIEPNILSQFQQNLPL
IRQQLKQQGLPPILLVMPQLRPLLARYARTFTQGLAVLSYNEIPENKQINVVGNLG
>Mature_696_residues
MFNRLKHLQTSTKGYIGIPIVLLMVLAMVILPLPPLLLDALFTFNIVLAILVLLVSTTAKRPLDISIFPTILLVATLLRL
TLNVASTRIVLLEGHNGSDAAGKVIQAFGEVVIGGNYVVGMVVFIILMIINFVVITKGGERISEVSARFTLDALPGKQMA
IDADLNAGLIDQETARQRRKEVANEADFHGSMDGASKFVRGDAVAGLLILFINIIGGISIGVFEHGLPASEAFKTYALLT
IGDGLVAQIPSLLLATAAAIIVTRINDSDNGMSETMHKQLLATPATLYTVAAIMAIIGMVPGMPHLAFFTFAAVLAFAGW
RQSKKPVQDTQIDQVEALSHAMQEEETALTWDDIPHVHTLSLALGYRLVHLVNKEQGAPLAQRIRGVRRNLSEQVGFLLP
EVRIRDNLSLKPNQYTIALNGEVIEQGFIEPERLMAIAVGETYGEVDGILGSDPAYQLPAVWIEHQDKAKALNMGYQVVD
DGTVIATHISKIMKTNLAELFTHDDVEAMTQRLTAQAPKLAEALAAALTPAQQLKVYRQLLLDQVPLKDIRTIANTMLES
SENTKDPILLAADVRCALKRTLVNLVAGQKNELNVYALSDELEQMLMTSLQQAQAAGAVMLDSFPIEPNILSQFQQNLPL
IRQQLKQQGLPPILLVMPQLRPLLARYARTFTQGLAVLSYNEIPENKQINVVGNLG

Specific function: Not Known. [C]

COG id: COG1298

COG function: function code NU; Flagellar biosynthesis pathway, component FlhA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=697, Percent_Identity=44.9067431850789, Blast_Score=553, Evalue=1e-158,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75836; Mature: 75836

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRLKHLQTSTKGYIGIPIVLLMVLAMVILPLPPLLLDALFTFNIVLAILVLLVSTTAK
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RPLDISIFPTILLVATLLRLTLNVASTRIVLLEGHNGSDAAGKVIQAFGEVVIGGNYVVG
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCEEECCCHHHH
MVVFIILMIINFVVITKGGERISEVSARFTLDALPGKQMAIDADLNAGLIDQETARQRRK
HHHHHHHHHHHHHEECCCCHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCHHHHHHHHH
EVANEADFHGSMDGASKFVRGDAVAGLLILFINIIGGISIGVFEHGLPASEAFKTYALLT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHEEEEE
IGDGLVAQIPSLLLATAAAIIVTRINDSDNGMSETMHKQLLATPATLYTVAAIMAIIGMV
ECCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
PGMPHLAFFTFAAVLAFAGWRQSKKPVQDTQIDQVEALSHAMQEEETALTWDDIPHVHTL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
SLALGYRLVHLVNKEQGAPLAQRIRGVRRNLSEQVGFLLPEVRIRDNLSLKPNQYTIALN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEC
GEVIEQGFIEPERLMAIAVGETYGEVDGILGSDPAYQLPAVWIEHQDKAKALNMGYQVVD
CHHHHHCCCCHHHEEEEEECCCHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHCCCEEEC
DGTVIATHISKIMKTNLAELFTHDDVEAMTQRLTAQAPKLAEALAAALTPAQQLKVYRQL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH
LLDQVPLKDIRTIANTMLESSENTKDPILLAADVRCALKRTLVNLVAGQKNELNVYALSD
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHH
ELEQMLMTSLQQAQAAGAVMLDSFPIEPNILSQFQQNLPLIRQQLKQQGLPPILLVMPQL
HHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHH
RPLLARYARTFTQGLAVLSYNEIPENKQINVVGNLG
HHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCC
>Mature Secondary Structure
MFNRLKHLQTSTKGYIGIPIVLLMVLAMVILPLPPLLLDALFTFNIVLAILVLLVSTTAK
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RPLDISIFPTILLVATLLRLTLNVASTRIVLLEGHNGSDAAGKVIQAFGEVVIGGNYVVG
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCEEECCCHHHH
MVVFIILMIINFVVITKGGERISEVSARFTLDALPGKQMAIDADLNAGLIDQETARQRRK
HHHHHHHHHHHHHEECCCCHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCHHHHHHHHH
EVANEADFHGSMDGASKFVRGDAVAGLLILFINIIGGISIGVFEHGLPASEAFKTYALLT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHEEEEE
IGDGLVAQIPSLLLATAAAIIVTRINDSDNGMSETMHKQLLATPATLYTVAAIMAIIGMV
ECCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
PGMPHLAFFTFAAVLAFAGWRQSKKPVQDTQIDQVEALSHAMQEEETALTWDDIPHVHTL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
SLALGYRLVHLVNKEQGAPLAQRIRGVRRNLSEQVGFLLPEVRIRDNLSLKPNQYTIALN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEC
GEVIEQGFIEPERLMAIAVGETYGEVDGILGSDPAYQLPAVWIEHQDKAKALNMGYQVVD
CHHHHHCCCCHHHEEEEEECCCHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHCCCEEEC
DGTVIATHISKIMKTNLAELFTHDDVEAMTQRLTAQAPKLAEALAAALTPAQQLKVYRQL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH
LLDQVPLKDIRTIANTMLESSENTKDPILLAADVRCALKRTLVNLVAGQKNELNVYALSD
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHH
ELEQMLMTSLQQAQAAGAVMLDSFPIEPNILSQFQQNLPLIRQQLKQQGLPPILLVMPQL
HHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHH
RPLLARYARTFTQGLAVLSYNEIPENKQINVVGNLG
HHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]