| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976073
Identifier: 156976073
GI number: 156976073
Start: 108991
End: 109416
Strand: Reverse
Name: 156976073
Synonym: VIBHAR_04843
Alternate gene names: NA
Gene position: 109416-108991 (Counterclockwise)
Preceding gene: 156976074
Following gene: 156976072
Centisome position: 4.96
GC content: 48.83
Gene sequence:
>426_bases ATGAAAGTGTTACAAATCGCAGGGATAGCCGTTGCACTGGTTGCTGGCTTTTACGCGCCTACCCTGTTCAAAAACTTCTC TTCAGCGCCCGAGCCTAAGTCGCTCGATGAATACTGTTTCCTCTCTACTGAACCTTGCATCCAACATGATGTTGCGATGA CGCTTAGCGTCGATACTGCTCAACCTCTGATCCCAGCTCAGCTCGAAGTCGAATGGCAAGACAGCGAAGCCGATCAGCTC GTATTAAGTTTGGTTGGTCGAGAAATGGAAATGGGCGAGCCAAAATTCATGCTGAAGAAAGTGGCGCCGGGTAAATTTGT GGGCGATGTGACATTGCCCGTTTGTACACAAGATTCAATGACGTGGGTTGGTGAGCTTTCCGACGGTAAAGACACCATCT ACCCAGCCCTCAAAATGCAAAGATAA
Upstream 100 bases:
>100_bases TTACTTGGGTATAGTGCACAATTTGTTGAAGTTACGAGTTTTCCTACATCCCATCTGTGCTAGGATGCTGGCAATGTTAA GTGATAAATACTGAATCTTA
Downstream 100 bases:
>100_bases GGAATAACTATGAGCCGTAACTGGTCTCTTTTTCTCGTGGTTGCTTTCGTTCTCGGCTTTGGTACTAAAACGTATCTAGA CGGCCAAAAAGAGGTAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTAQPLIPAQLEVEWQDSEADQL VLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSMTWVGELSDGKDTIYPALKMQR
Sequences:
>Translated_141_residues MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTAQPLIPAQLEVEWQDSEADQL VLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSMTWVGELSDGKDTIYPALKMQR >Mature_141_residues MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTAQPLIPAQLEVEWQDSEADQL VLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSMTWVGELSDGKDTIYPALKMQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15485; Mature: 15485
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTA CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHCCEEEEEEECCC QPLIPAQLEVEWQDSEADQLVLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSM CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCEEEEEECCCCC TWVGELSDGKDTIYPALKMQR EEEEECCCCCCCCCCCEECCC >Mature Secondary Structure MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTA CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHCCEEEEEEECCC QPLIPAQLEVEWQDSEADQLVLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSM CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCEEEEEECCCCC TWVGELSDGKDTIYPALKMQR EEEEECCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA