Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976073

Identifier: 156976073

GI number: 156976073

Start: 108991

End: 109416

Strand: Reverse

Name: 156976073

Synonym: VIBHAR_04843

Alternate gene names: NA

Gene position: 109416-108991 (Counterclockwise)

Preceding gene: 156976074

Following gene: 156976072

Centisome position: 4.96

GC content: 48.83

Gene sequence:

>426_bases
ATGAAAGTGTTACAAATCGCAGGGATAGCCGTTGCACTGGTTGCTGGCTTTTACGCGCCTACCCTGTTCAAAAACTTCTC
TTCAGCGCCCGAGCCTAAGTCGCTCGATGAATACTGTTTCCTCTCTACTGAACCTTGCATCCAACATGATGTTGCGATGA
CGCTTAGCGTCGATACTGCTCAACCTCTGATCCCAGCTCAGCTCGAAGTCGAATGGCAAGACAGCGAAGCCGATCAGCTC
GTATTAAGTTTGGTTGGTCGAGAAATGGAAATGGGCGAGCCAAAATTCATGCTGAAGAAAGTGGCGCCGGGTAAATTTGT
GGGCGATGTGACATTGCCCGTTTGTACACAAGATTCAATGACGTGGGTTGGTGAGCTTTCCGACGGTAAAGACACCATCT
ACCCAGCCCTCAAAATGCAAAGATAA

Upstream 100 bases:

>100_bases
TTACTTGGGTATAGTGCACAATTTGTTGAAGTTACGAGTTTTCCTACATCCCATCTGTGCTAGGATGCTGGCAATGTTAA
GTGATAAATACTGAATCTTA

Downstream 100 bases:

>100_bases
GGAATAACTATGAGCCGTAACTGGTCTCTTTTTCTCGTGGTTGCTTTCGTTCTCGGCTTTGGTACTAAAACGTATCTAGA
CGGCCAAAAAGAGGTAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTAQPLIPAQLEVEWQDSEADQL
VLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSMTWVGELSDGKDTIYPALKMQR

Sequences:

>Translated_141_residues
MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTAQPLIPAQLEVEWQDSEADQL
VLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSMTWVGELSDGKDTIYPALKMQR
>Mature_141_residues
MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTAQPLIPAQLEVEWQDSEADQL
VLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSMTWVGELSDGKDTIYPALKMQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15485; Mature: 15485

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTA
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHCCEEEEEEECCC
QPLIPAQLEVEWQDSEADQLVLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSM
CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCEEEEEECCCCC
TWVGELSDGKDTIYPALKMQR
EEEEECCCCCCCCCCCEECCC
>Mature Secondary Structure
MKVLQIAGIAVALVAGFYAPTLFKNFSSAPEPKSLDEYCFLSTEPCIQHDVAMTLSVDTA
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHCCEEEEEEECCC
QPLIPAQLEVEWQDSEADQLVLSLVGREMEMGEPKFMLKKVAPGKFVGDVTLPVCTQDSM
CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCEEEEEECCCCC
TWVGELSDGKDTIYPALKMQR
EEEEECCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA