| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976067
Identifier: 156976067
GI number: 156976067
Start: 103743
End: 104237
Strand: Reverse
Name: 156976067
Synonym: VIBHAR_04837
Alternate gene names: NA
Gene position: 104237-103743 (Counterclockwise)
Preceding gene: 156976068
Following gene: 156976058
Centisome position: 4.73
GC content: 49.09
Gene sequence:
>495_bases ATGAGATTGTTGTCTGGATTCTCGTCAAAAGAGTGGCTTTTAACAGCCGTGGTGCTCGGTGGTTTAACCGCTTATGCCGT TTATCACTCCAAGCAACGTACTTCTGATGCTCGCACAGCCGCCATCCAAGTGATCTTCGCTGACATGCAGTATCACGTTT CTATTCTGAATCAGAATGCGAAAGCCTTTAAGCAAGAGCACGGGGCCGACCAGTGCGTCTTAACCGCCGCTGGGTATCAA GAGTTTTACAATGGCTACCCAGAAACCCAAAGTGAGTGCGGTGAGCAGATCAGCTTCTTCGATAACCTAACCATCACCGA TGAGATGAAACAGACAGATTTAGTCTTCATCGAGAACAACCAATACTCCATGGTTGGGTATGGCAATGACGAATCACCAG AAGCGCTCATGGCAGGCAAGTGCTACGCCTACTACCGAATGGATGGCAAAGGCGCGGATGGACACAGCTTTAAGGTTGAT ACCTCCCGCTGTTAG
Upstream 100 bases:
>100_bases TTTTCTGAAACACACAATTTGCCCTTAAATTTTCGAAAATCGATGCGTAGAATCCCGCCCTATTATGCGTATGGTTGAGT TGTACATAGGGTAAAAACCA
Downstream 100 bases:
>100_bases GAGAGACTTAACTTCGTTTAGAACAAGTCACAAAAATCAAAAAGGGAGCGTTGTGCTCCCTTTCTGCTATTTTCAACCTG AGTTTACGCTTGGCTGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRLLSGFSSKEWLLTAVVLGGLTAYAVYHSKQRTSDARTAAIQVIFADMQYHVSILNQNAKAFKQEHGADQCVLTAAGYQ EFYNGYPETQSECGEQISFFDNLTITDEMKQTDLVFIENNQYSMVGYGNDESPEALMAGKCYAYYRMDGKGADGHSFKVD TSRC
Sequences:
>Translated_164_residues MRLLSGFSSKEWLLTAVVLGGLTAYAVYHSKQRTSDARTAAIQVIFADMQYHVSILNQNAKAFKQEHGADQCVLTAAGYQ EFYNGYPETQSECGEQISFFDNLTITDEMKQTDLVFIENNQYSMVGYGNDESPEALMAGKCYAYYRMDGKGADGHSFKVD TSRC >Mature_164_residues MRLLSGFSSKEWLLTAVVLGGLTAYAVYHSKQRTSDARTAAIQVIFADMQYHVSILNQNAKAFKQEHGADQCVLTAAGYQ EFYNGYPETQSECGEQISFFDNLTITDEMKQTDLVFIENNQYSMVGYGNDESPEALMAGKCYAYYRMDGKGADGHSFKVD TSRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18327; Mature: 18327
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLSGFSSKEWLLTAVVLGGLTAYAVYHSKQRTSDARTAAIQVIFADMQYHVSILNQNA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHEEEEEEECHHEEEHHHCCCH KAFKQEHGADQCVLTAAGYQEFYNGYPETQSECGEQISFFDNLTITDEMKQTDLVFIENN HHHHHHCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEECC QYSMVGYGNDESPEALMAGKCYAYYRMDGKGADGHSFKVDTSRC CEEEEEECCCCCCCCEECCCEEEEEEECCCCCCCCEEEECCCCC >Mature Secondary Structure MRLLSGFSSKEWLLTAVVLGGLTAYAVYHSKQRTSDARTAAIQVIFADMQYHVSILNQNA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHEEEEEEECHHEEEHHHCCCH KAFKQEHGADQCVLTAAGYQEFYNGYPETQSECGEQISFFDNLTITDEMKQTDLVFIENN HHHHHHCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEECC QYSMVGYGNDESPEALMAGKCYAYYRMDGKGADGHSFKVDTSRC CEEEEEECCCCCCCCEECCCEEEEEEECCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA