| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976055
Identifier: 156976055
GI number: 156976055
Start: 89380
End: 89484
Strand: Reverse
Name: 156976055
Synonym: VIBHAR_04825
Alternate gene names: NA
Gene position: 89484-89380 (Counterclockwise)
Preceding gene: 156976056
Following gene: 156976050
Centisome position: 4.06
GC content: 40.95
Gene sequence:
>105_bases ATGACTAAAAAGAGCGGCATCTTAGACAAAGCGATGAAAAAAGCCAAGTGCGTTTCTATTGGGGTAGAGAACAACACTTG GCTTGGTATGGGTTATCTTGATTGA
Upstream 100 bases:
>100_bases TGCGTACTGTTTCTTTCACTTCTGCATGGACGGTTGTGCGATAAAAAACAAAGAGATGTAAAGAAACAAGGCGGGACCTC AAAGTGGAATATCGCCATCG
Downstream 100 bases:
>100_bases GAATGACTTATTGAGTGTTTGGCGTCACTTTGAAGAAGCGCCCTTGTAATGATGACATTGGGATCTGGTATTGCCCGTTA CTTGGCGTGATTTGTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 34; Mature: 33
Protein sequence:
>34_residues MTKKSGILDKAMKKAKCVSIGVENNTWLGMGYLD
Sequences:
>Translated_34_residues MTKKSGILDKAMKKAKCVSIGVENNTWLGMGYLD >Mature_33_residues TKKSGILDKAMKKAKCVSIGVENNTWLGMGYLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3732; Mature: 3600
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 8.8 %Met (Translated Protein) 11.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKSGILDKAMKKAKCVSIGVENNTWLGMGYLD CCCCCCHHHHHHHCCEEEEECCCCCCEEEEECCC >Mature Secondary Structure TKKSGILDKAMKKAKCVSIGVENNTWLGMGYLD CCCCCHHHHHHHCCEEEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA