Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976049

Identifier: 156976049

GI number: 156976049

Start: 81751

End: 81990

Strand: Reverse

Name: 156976049

Synonym: VIBHAR_04819

Alternate gene names: NA

Gene position: 81990-81751 (Counterclockwise)

Preceding gene: 156976050

Following gene: 156976048

Centisome position: 3.72

GC content: 45.0

Gene sequence:

>240_bases
TTGTCGAGCATTAATGATGCCGTTTGTTCGACTCGGGCAATCTTCCTCTCGACCAGGGCTTATCGCCACAACCAAAGCCA
GAGCCAAGATACCATTTTGATTGTCACCACTATGAAAGCCATAGAATCAATCATCATCGGCACTACTGTTTACATCGACA
CTTTCTGGGTGCGTTTCAACACTCGGTCACTATCGTTTAGCACCCAACGTTCGTCCTACTTTGATGAATGCCAATATTAA

Upstream 100 bases:

>100_bases
CAACTAGGCCAAATGGAACACCATATGCATTGATACGTAAATGTAATTAATGTAATGCTTAGTAACATCTAGTGTTACTT
TTAGTCTTTCGCGCTATGAC

Downstream 100 bases:

>100_bases
CGTTCAACCACTAGTCAATACCGCAGCCTCCGTTGGCAAAGTCGTGCTGCCTTATGCAATATCAGCAGGACACGCTTACG
TTAATACGCCCTACTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSSINDAVCSTRAIFLSTRAYRHNQSQSQDTILIVTTMKAIESIIIGTTVYIDTFWVRFNTRSLSFSTQRSSYFDECQY

Sequences:

>Translated_79_residues
MSSINDAVCSTRAIFLSTRAYRHNQSQSQDTILIVTTMKAIESIIIGTTVYIDTFWVRFNTRSLSFSTQRSSYFDECQY
>Mature_78_residues
SSINDAVCSTRAIFLSTRAYRHNQSQSQDTILIVTTMKAIESIIIGTTVYIDTFWVRFNTRSLSFSTQRSSYFDECQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9117; Mature: 8986

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSINDAVCSTRAIFLSTRAYRHNQSQSQDTILIVTTMKAIESIIIGTTVYIDTFWVRFN
CCCCCCHHHHHHHHEEEHHHHHCCCCCCCCEEEEEEEHHHHHHHHHCCEEEEEEEEEEEE
TRSLSFSTQRSSYFDECQY
CCEEEECCCCCCCHHCCCC
>Mature Secondary Structure 
SSINDAVCSTRAIFLSTRAYRHNQSQSQDTILIVTTMKAIESIIIGTTVYIDTFWVRFN
CCCCCHHHHHHHHEEEHHHHHCCCCCCCCEEEEEEEHHHHHHHHHCCEEEEEEEEEEEE
TRSLSFSTQRSSYFDECQY
CCEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA