| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976018
Identifier: 156976018
GI number: 156976018
Start: 53163
End: 53279
Strand: Reverse
Name: 156976018
Synonym: VIBHAR_04788
Alternate gene names: NA
Gene position: 53279-53163 (Counterclockwise)
Preceding gene: 156976019
Following gene: 156976016
Centisome position: 2.42
GC content: 40.17
Gene sequence:
>117_bases ATGCCTTGCATAACAATAGTAGAACAGTTGAGCCCTTCACTTTGTTTGCAGGATGAGCTGAAGCTGATTCACTTTCCATT AAAAAAGACTCCCATTAGGGAGCCTTGGTTTAAATAG
Upstream 100 bases:
>100_bases GATGGCGGTTTATTTGGTGATATGAACGGCATTTCGGTGACGCAGTTGGTGTATTTTTGTGATCAAGCGCAAAGAGGAAG GTTATGGAAGGAAGGCCACA
Downstream 100 bases:
>100_bases GGGGAAATAAAAATCTGTGTTTACTGAGCGTCTTTTTGCAGTGCTTCAAATTTCTTCAGTTGCTCTTGCTGACGCTTTTC TAACGTCGCTTTCTGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 37
Protein sequence:
>38_residues MPCITIVEQLSPSLCLQDELKLIHFPLKKTPIREPWFK
Sequences:
>Translated_38_residues MPCITIVEQLSPSLCLQDELKLIHFPLKKTPIREPWFK >Mature_37_residues PCITIVEQLSPSLCLQDELKLIHFPLKKTPIREPWFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4494; Mature: 4362
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCITIVEQLSPSLCLQDELKLIHFPLKKTPIREPWFK CCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PCITIVEQLSPSLCLQDELKLIHFPLKKTPIREPWFK CHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA