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The map label for this gene is ohrR [H]

Identifier: 156975993

GI number: 156975993

Start: 30549

End: 30980

Strand: Reverse

Name: ohrR [H]

Synonym: VIBHAR_04763

Alternate gene names: 156975993

Gene position: 30980-30549 (Counterclockwise)

Preceding gene: 156975997

Following gene: 156975992

Centisome position: 1.41

GC content: 48.61

Gene sequence:

>432_bases
ATGACCGACGACGATAAACTCTTACTCGAAAACCAAGTTTGCTTCCCGCTCTACAGCGCAGCAAATGCAGTGATCCGAGC
TTACCGCCCGTTGCTTGACGAGCTTGATCTGACTTATTCGCAGTACTTAGTGATGATGGTGCTGTGGGAGAAAGACGGTG
CCAGTGTGAAAGAACTGGGCTCACAACTGCATTTGGACTCAGGCACACTAACGCCGCTACTTAAACGCTTAGAAGCAAAA
GGCTATGTAGAGCGCGGCCGAAGTGAAACCGATGAGCGCGTTCGCGTACTCAATCTAACCGAGCAAGGTCGTAACCTTAA
AGAGCAAGCTAAGTCGGTGCCAAACGCCATGATGTGCAAAATCACATTAGAGCTAGATGAAATGATCATGCTGAAGAAGT
TGTGTGGCAAAGTGCTCGACAATCTGAGCTAA

Upstream 100 bases:

>100_bases
AGATCGTTTGCAACTATATTGTGCACAATTTATTTTATGACTCTCTTTCTCTGTGAGCAGGTAGGCAACGCCAATGAGCC
AGTGTTACACCGACAACACC

Downstream 100 bases:

>100_bases
CAAGATAGAAGCATCCGCTTCCTCACTTCCTATTAGAAAGAGCCTGCCGAGATGCAGGCTCTTTCGATCTTAGCTAGAAG
ATCGACTCAAAGTAATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTDDDKLLLENQVCFPLYSAANAVIRAYRPLLDELDLTYSQYLVMMVLWEKDGASVKELGSQLHLDSGTLTPLLKRLEAK
GYVERGRSETDERVRVLNLTEQGRNLKEQAKSVPNAMMCKITLELDEMIMLKKLCGKVLDNLS

Sequences:

>Translated_143_residues
MTDDDKLLLENQVCFPLYSAANAVIRAYRPLLDELDLTYSQYLVMMVLWEKDGASVKELGSQLHLDSGTLTPLLKRLEAK
GYVERGRSETDERVRVLNLTEQGRNLKEQAKSVPNAMMCKITLELDEMIMLKKLCGKVLDNLS
>Mature_142_residues
TDDDKLLLENQVCFPLYSAANAVIRAYRPLLDELDLTYSQYLVMMVLWEKDGASVKELGSQLHLDSGTLTPLLKRLEAKG
YVERGRSETDERVRVLNLTEQGRNLKEQAKSVPNAMMCKITLELDEMIMLKKLCGKVLDNLS

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16251; Mature: 16120

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50995 HTH_MARR_2 ; PS00226 IF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDDKLLLENQVCFPLYSAANAVIRAYRPLLDELDLTYSQYLVMMVLWEKDGASVKELG
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SQLHLDSGTLTPLLKRLEAKGYVERGRSETDERVRVLNLTEQGRNLKEQAKSVPNAMMCK
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEECHHHCCCHHHHHHHCCCCEEEE
ITLELDEMIMLKKLCGKVLDNLS
EEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDDDKLLLENQVCFPLYSAANAVIRAYRPLLDELDLTYSQYLVMMVLWEKDGASVKELG
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SQLHLDSGTLTPLLKRLEAKGYVERGRSETDERVRVLNLTEQGRNLKEQAKSVPNAMMCK
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEECHHHCCCHHHHHHHCCCCEEEE
ITLELDEMIMLKKLCGKVLDNLS
EEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]