Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156975978

Identifier: 156975978

GI number: 156975978

Start: 17581

End: 18276

Strand: Reverse

Name: 156975978

Synonym: VIBHAR_04748

Alternate gene names: NA

Gene position: 18276-17581 (Counterclockwise)

Preceding gene: 156975979

Following gene: 156975977

Centisome position: 0.83

GC content: 46.41

Gene sequence:

>696_bases
ATGAGTAACACCACGGCGAAAAAGTCGAATCCCCTATTCGAGATCCTGTTTAACGTCATCATCCCTTCATTCATTTTGAT
GAAGTTCAGTGGTGAAGAGCACCTAGGTACAGCAATGGCACTGGTTGTCGCCTTGATGTTCCCATTGGTGTATGGCGGCA
TGGACCTTATCCGCAACAAGAAATTCAACTTCATTTCTGCACTTGGTTTTATCAGTGTGCTGTTAACTGGCGGCATCGGC
TTGCTAGAGTTAGATACGCGTTGGTTGGCGCTAAAAGAAGCATTAATTCCGGGTTTGATTGGTATCGCGGTACTGGGCTC
TACGTTCACCCGCTACCCGCTTATGCAGAAGATGCTGCTGAACGACACGATTTTGAACCTACCGCTGATTAACGAGCGTT
TAGAACAGAATGGCAAAACTCAGGCGTTTGAACGTTGCTTGATGTCTTCTAACTACCTATTCGCAAGTACCTTCGCGTTC
TCATCAGCGATGAACTACTTCCTAGCAACTTGGATTGTGACTAGCCCTGCAGGTACTGCCGCGTTCAATGAAGAGTTGGG
CAAGCTAACGCTTTACAGCTACCCAATGATTGCGATTCCGAGCATGTTGATGATGTTTGGTATTTTCTACTACATCTGGC
GCCAAGTTCGCGCAATGACGTCGCTAGAAACTGAGCAGATTTTTCATACCAAGTAA

Upstream 100 bases:

>100_bases
CGTTACACAACTCGGGGCTTTAAGGCTTTACATCTGGCGCAAGGAGTAGAACACTTCCCCCAAAGTAAAATTCAGCCGAC
ATAGTAGAGTCAGTAAAGTT

Downstream 100 bases:

>100_bases
TACATGCTCAAATGCATTAAGATAAAAAAGAACCCCGATAGTTGCTCGCCAATTATCGGGGTTTTGTTTTTTGAATGAGG
ACACTACGACGCACGTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSNTTAKKSNPLFEILFNVIIPSFILMKFSGEEHLGTAMALVVALMFPLVYGGMDLIRNKKFNFISALGFISVLLTGGIG
LLELDTRWLALKEALIPGLIGIAVLGSTFTRYPLMQKMLLNDTILNLPLINERLEQNGKTQAFERCLMSSNYLFASTFAF
SSAMNYFLATWIVTSPAGTAAFNEELGKLTLYSYPMIAIPSMLMMFGIFYYIWRQVRAMTSLETEQIFHTK

Sequences:

>Translated_231_residues
MSNTTAKKSNPLFEILFNVIIPSFILMKFSGEEHLGTAMALVVALMFPLVYGGMDLIRNKKFNFISALGFISVLLTGGIG
LLELDTRWLALKEALIPGLIGIAVLGSTFTRYPLMQKMLLNDTILNLPLINERLEQNGKTQAFERCLMSSNYLFASTFAF
SSAMNYFLATWIVTSPAGTAAFNEELGKLTLYSYPMIAIPSMLMMFGIFYYIWRQVRAMTSLETEQIFHTK
>Mature_230_residues
SNTTAKKSNPLFEILFNVIIPSFILMKFSGEEHLGTAMALVVALMFPLVYGGMDLIRNKKFNFISALGFISVLLTGGIGL
LELDTRWLALKEALIPGLIGIAVLGSTFTRYPLMQKMLLNDTILNLPLINERLEQNGKTQAFERCLMSSNYLFASTFAFS
SAMNYFLATWIVTSPAGTAAFNEELGKLTLYSYPMIAIPSMLMMFGIFYYIWRQVRAMTSLETEQIFHTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25937; Mature: 25806

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTTAKKSNPLFEILFNVIIPSFILMKFSGEEHLGTAMALVVALMFPLVYGGMDLIRNK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
KFNFISALGFISVLLTGGIGLLELDTRWLALKEALIPGLIGIAVLGSTFTRYPLMQKMLL
CHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDTILNLPLINERLEQNGKTQAFERCLMSSNYLFASTFAFSSAMNYFLATWIVTSPAGTA
HHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AFNEELGKLTLYSYPMIAIPSMLMMFGIFYYIWRQVRAMTSLETEQIFHTK
HHHHHHCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNTTAKKSNPLFEILFNVIIPSFILMKFSGEEHLGTAMALVVALMFPLVYGGMDLIRNK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
KFNFISALGFISVLLTGGIGLLELDTRWLALKEALIPGLIGIAVLGSTFTRYPLMQKMLL
CHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDTILNLPLINERLEQNGKTQAFERCLMSSNYLFASTFAFSSAMNYFLATWIVTSPAGTA
HHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AFNEELGKLTLYSYPMIAIPSMLMMFGIFYYIWRQVRAMTSLETEQIFHTK
HHHHHHCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA