| Definition | Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome. |
|---|---|
| Accession | NC_009783 |
| Length | 3,765,351 |
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Identifier: 156975660
GI number:
Start: 3429379
End: 3431511
Strand: Reverse
Name: Not Available
Synonym: VIBHAR_03393
Alternate gene names: NA
Gene position: NA
Preceding gene: 342380682
Following gene: 156975659
Centisome position: NA
GC content: NA
Gene sequence:
>2133_bases ATGTTCGAAAAACCAGTTGTTAAAACGTTCCAGTACGGTAACCACACAGTTACTCTAGAAACTGGCGTTATCGCACGTCA AGCTACGGCTGCAGTAATGGTTACTATGGACGATACAGCAGTATTCGTTTCTGTAGTCGGTAAAAAAGAAGCGGTTGAAG GTCAAGACTTCTTCCCTCTAACAGTTAACTACCAAGAGCGTACTTACGCAGCAGGTAAAATCCCAGGTGGTTTCTTCAAG CGTGAAGGTCGTCCTTCTGAAGGTGAAACGCTAACGGCTCGTCTAATCGACCGTCCAATCCGTCCACTATTCCCAGATGC ATTCAAAAACGAAGTACAAGTTATTGCAACAGTAGTATCTGTGAACCCAGACGTTCAACCAGACATCCCAACAATGATTG GTACGTCTGCTGCGCTAGCTATCTCTGGTATTCCGTTCAACGGTCCTATCGGTGCTGCGCGTGTTGGTCACATCGACGGT CAACTAGTACTTAACCCAAGCAACACTGAACTAGAAGCATCTAAGCTAGACCTAGTTGTTGCGGGTACTGAATCTGCAGT ACTAATGGTTGAATCAGAAGCTGACAACCTAACTGAAGAAGAAATGCTATCTGCTGTTGTATTCGGTCACGATCAACAAC AAGCTGTGATCAAAGCAATCAACGAATTCAAAGCTGAAGTTGCTACTCCTGCTTGGGATTGGGTTGCTCCAGCAGAGAAC ACTGCGCTGGTAACTAAGATTGCTGAACTTGCTGAAGCAAAACTGGTTGAAGCTTACCAAATCACTGAGAAGATGGCTCG TTACGACCGCATCCACGAGATCGCTGGTGAAGTTAACGAAGTGCTGCTTGCTGAAGATCCAGAAGCAAACACAAAAGAAA TCCACACTATCTTCCACGATCTAGAGAAGACAGTGGTACGTCGCAGCATCATCGCTGGTAACCCACGTATCGACGGTCGT GAAAAAGACATGGTTCGTGCGCTTGACGTACGTACTGGTGTTCTTCCTCGTACTCACGGTTCTTCACTATTTACTCGTGG TGAAACTCAGGCGCTAGTAACTGCGACTCTAGGTACGCAGCGTGACGCTCAAATCATTGATGAGCTAACAGGTGAGCGTA AAGATCACTTCCTACTGCACTACAACTTCCCTCCATACTGTGTTGGTGAAACTGGTTTTGTAGGTTCTCCTAAGCGTCGT GAAATCGGTCACGGTAAACTGGCTAAACGCGGTATCGCAGCAGTAATGCCTTCTGTTGATGAGTTCCCATACACAGTACG TGTTGTATCGGAAATCACTGAATCTAACGGTTCTTCTTCAATGGCTTCTGTATGTGGTACTTCTCTTGCTCTTATGGACG CAGGTGTGCCAATCAAGTCTTCTGTTGCGGGTATCGCAATGGGTCTTGTTAAAGAAGGCGACGACTTCGTTGTTCTTTCT GACATCCTTGGTGACGAAGACCACCTAGGTGACATGGACTTTAAAGTAGCAGGTACTAACACTGGTATCACTGCACTTCA AATGGACATCAAGATCGAAGGTATCACTAAAGAGATCATGCAAATTGCGCTTAACCAAGCTCAAGGTGCACGTAAGCACA TCCTATCTGTAATGGATGAAGCTATCTCTGGTGCTCGTGAAGACATCTCTGAATTCGCTCCTCGCATTCACACAATGAAG ATCAGCGCAGAGAAGATCAAAGACGTTATCGGTAAAGGTGGTGCAGTTATCCGTGCTCTAACTGAAGAGACTGGTACAAC TATCGAAATCGAAGACGACGGTACTATCAAGATTGCAGCAACTGAAGGTGCAGCAGCGAAAGAAGCTATCCGCCGTATCG AAGAGATCACTGCTGAAGTTGAAGTAGGTCGTATCTACACTGGTAAAGTTGCACGTCTAGCTGACTTTGGTGCATTCGTA ACGGTTCTTCCAGGTAAAGATGGTCTAGTACACATCTCTCAAATCGCTGAAAAACGCGTTGAGAAAGTGTCTGACTACCT AACTGAAGGTCAAGAAGTTCAAGTTAAAGTTCTTGAAATTGATCGTCAAGGCCGTGTACGTCTAAGTATGAAAGAAGCAG TAGAGAAGCCAGCAGAAGAAGCAAACGACGCTTCTGAAGCAAAAGGCGAGTAA
Upstream 100 bases:
>100_bases ATGTCAGTTTGTTTTCACTAGTCGCGATTCGTAATGCCTTGGGTATCAATCAATACTCTCTAAGCAAATCAATCGATGCG CTTGGAAACAAGGAATAACA
Downstream 100 bases:
>100_bases TCTAAGTTTCGACTTTTGGTCTTTTATTAGCTTAAGAGCCTGAAAGCATGCTATAAAAGGGGAGCATTTTCGCTCCCCTT TTTTTTGGCCTGTTTCACCA
Product: polynucleotide phosphorylase/polyadenylase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>710_residues MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTAVFVSVVGKKEAVEGQDFFPLTVNYQERTYAAGKIPGGFFK REGRPSEGETLTARLIDRPIRPLFPDAFKNEVQVIATVVSVNPDVQPDIPTMIGTSAALAISGIPFNGPIGAARVGHIDG QLVLNPSNTELEASKLDLVVAGTESAVLMVESEADNLTEEEMLSAVVFGHDQQQAVIKAINEFKAEVATPAWDWVAPAEN TALVTKIAELAEAKLVEAYQITEKMARYDRIHEIAGEVNEVLLAEDPEANTKEIHTIFHDLEKTVVRRSIIAGNPRIDGR EKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQRDAQIIDELTGERKDHFLLHYNFPPYCVGETGFVGSPKRR EIGHGKLAKRGIAAVMPSVDEFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS DILGDEDHLGDMDFKVAGTNTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDEAISGAREDISEFAPRIHTMK ISAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAATEGAAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFV TVLPGKDGLVHISQIAEKRVEKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVEKPAEEANDASEAKGE
Sequences:
NA
Specific function: NA
COG id: COG1185
COG function: function code J; Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA