Definition Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome.
Accession NC_009783
Length 3,765,351

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 156975634

GI number:

Start: 3398670

End: 3401060

Strand: Direct

Name: Not Available

Synonym: VIBHAR_03367

Alternate gene names: NA

Gene position: NA

Preceding gene: 156975633

Following gene: 156975635

Centisome position: NA

GC content: NA

Gene sequence:

>2391_bases
ATGAAAAATCTCATTTTACACTTTATTCTAGTTTTCACTGTAAAAGCTGCATTAGCTCATAGCTGGTCGTTCCCATTCCC
TGTCATTTGGGGTGAAAATACTATCGGCCAAGTGAGCGCGTACTCAGACGGTATGACCGTAGATTCAATCAACGTTGAAC
AGCTCGCTCAGTCAGTAGAGAAACTGATAAATGATGAAACTCTCGTGGCATTGAGAGGATTCTCTGAAAAATATATCACG
GTTGAACAATTGACTCGTATTGGAATCAACGCAAATTTCGACACATCCGAACAAAGTATTAATCTAGTCATAGATGAGTC
TGCAGCCGCGGACTTTTTACTCTCCTTCGGAAGCAAATACGAGCCTGCACAGTACTCGGAAAGCGCATTCTGGACGATAC
AAAATACACTGAACGCCAGTACTGATTACACCTTATTTAGCGATTCTAACGCCAAAGACACGCAAACTTGGCTAGGGGAA
TGGTTAGTTCGAGCCAATATTGGTGGCGTTCGAGGGGTAAACCTTGATGTCTCCGGCTTCGTCACTGGCGGTAATAATGT
CGATTCCGATGTCTATCGTGGTGAAGCTCGTCTTTTTTTCGATGAACCCAGCACACCTTGGCGCTTCACCTTTGGGGATG
TGACCCAAACTAGTGCTGGCCATCTGCCGAGCACGCCTCTGGGCGGAGTCGCTTTTGAACGTTTGTACCAAGATTTACAG
CCCACCAGAAACATTCAGAACGGCGGGACGCAACCTCTAGTATTAAATGAAAGCGCCGATGTCGAAATCTACATTAACGA
TATCTTCCTCACCGAGATTAGATTGCCACCGGGCCGATATACACTGGATGATCTACCTCTCGTGTCAGGTACCAATGATG
TGCGGTTAGACATTAGCTATCAATCAGGCCGCACCGACACCATCGTTTACAGTCAATTTTTTAACTCTCGTTTACTGCGT
GAAGGCATTTCTGACTTCGGTTTTTACTCTGGGTTAATCTCGACGATCGAGGATAACAACTTTAAATACGACGATGAACA
GTGGGTCACGTCGGGATACTACGACTTCGGTATCAGCGACACATTAACGCTGGGTGTAAACGGACTTTACCATCCTAAGG
GCCAACAACTTGGCGTTATTGCCACTATCGGTTCTGATTGGGGGAATGTAGGTGTTCGAGCATCTGCGCAAAACAATAAA
CCTAATGATGACACTGGCAGTATCTACAGCCTCGATTATTCCCATCAAGTGTGGGGAACGGATAGCTATGGCTCTCCAAA
CTTTCGTCTCGGCGTCGAATACCAAGATAAGTACTTCGCATTACCTTGGCAAATAGCCGAACCAAGAACAGGCTTACGCG
TATTCTCTAACTACGTGCTCACCATTACAGATGACCTTAGTCTAATATTAAGTGGAGACTATCGTGACTTCGAAGAGGAA
GAGGTTGAATGGCTTGCGTCATCTGAAGTCGCTTGGCAATTTTACAGCCTGTCACTCTCTGCTGGTGTAGAGAAAGAGGA
GAATCCAAACGATAACATTGACGAGACGCGCTTCACTTTCTCTGCAGACTGGGACTGGAACTCTGTGTCTGGGGAATACA
ATGCAAACGTCTCTTACTCCAACGAGCCCGATACTTACAGAGCTCAATTTCAACGCCCTTCCGATGATTACACAGGCAGC
TATGGCTATGCGCTTACAGCAGAAGGTGATGCCGACTCTCAAACTTATTCTGTAGAGGGCAATTATGTGGCAAACCGCTT
CATCACTGATGCTAAAGTCTCTCACCTCGACTTTGACAATTCCGACAGTTACCAAACCGCTTCATTGCGAGCAAGTACGG
CGCTGACGCTGGCTGATGGCAACTTAGCTTGGTCACGTCCTATCAATGGACCTGTTGCCATCGTCGCCGTTCATGACTCT
TTGGATGCTGATGTTGAAATCAACGCCGTTGCCGACGACCCAGCTGAAGCGATTTCAACTTCGGCGATAAATAATGCCGT
TCAACTATCTGGTGGGCATCAGTTGTCTAGTGTCTACATCAATGTCCCAGATGCTCCTGTCGGCTATGACTTTGGTGACC
ACGAATACAACATCACACCAGGGTCACAAACTGGCCATCTAATAAACATCGGCTCAATCGCGTCAAAGACCATAATTGGC
ACACTCGAAATCAGTTCTAAAAAACCACTAAAGCTCTACCAAGGGCAGTTAGTTGGACAACAGAAAACCTATGACTTTTT
CACCAATCGATCAGGTCGATTTGTTGTAGAAGGTATTGCTCCGGGCACCTACACCATCACGGTTGAAGGATTCAGCCCAA
CAAAACTAAACGTACCAGAAACCAATGAAAATCTGATTTATCTACCCACTTTACTTATTAAAGAGGGATAA

Upstream 100 bases:

>100_bases
GCTTATTTAATGCCGGGGTCAACGGTAAAGTACACTCTACCAAGTGAGCTGGGGCTGCCCCAAACAGTTTCTGTTAAAAC
AATAGACTAGTGAGTTTTTT

Downstream 100 bases:

>100_bases
ACAATGAAACACTTATTCCAAATATCAGTGTTCAGTCTCGCCATATTATCTCAACCCGTATGGGCAGAATGCAGTGGCAA
ATGGACACTAAACGTTGACC

Product: P pilus assembly protein, porin PapC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>796_residues
MKNLILHFILVFTVKAALAHSWSFPFPVIWGENTIGQVSAYSDGMTVDSINVEQLAQSVEKLINDETLVALRGFSEKYIT
VEQLTRIGINANFDTSEQSINLVIDESAAADFLLSFGSKYEPAQYSESAFWTIQNTLNASTDYTLFSDSNAKDTQTWLGE
WLVRANIGGVRGVNLDVSGFVTGGNNVDSDVYRGEARLFFDEPSTPWRFTFGDVTQTSAGHLPSTPLGGVAFERLYQDLQ
PTRNIQNGGTQPLVLNESADVEIYINDIFLTEIRLPPGRYTLDDLPLVSGTNDVRLDISYQSGRTDTIVYSQFFNSRLLR
EGISDFGFYSGLISTIEDNNFKYDDEQWVTSGYYDFGISDTLTLGVNGLYHPKGQQLGVIATIGSDWGNVGVRASAQNNK
PNDDTGSIYSLDYSHQVWGTDSYGSPNFRLGVEYQDKYFALPWQIAEPRTGLRVFSNYVLTITDDLSLILSGDYRDFEEE
EVEWLASSEVAWQFYSLSLSAGVEKEENPNDNIDETRFTFSADWDWNSVSGEYNANVSYSNEPDTYRAQFQRPSDDYTGS
YGYALTAEGDADSQTYSVEGNYVANRFITDAKVSHLDFDNSDSYQTASLRASTALTLADGNLAWSRPINGPVAIVAVHDS
LDADVEINAVADDPAEAISTSAINNAVQLSGGHQLSSVYINVPDAPVGYDFGDHEYNITPGSQTGHLINIGSIASKTIIG
TLEISSKKPLKLYQGQLVGQQKTYDFFTNRSGRFVVEGIAPGTYTITVEGFSPTKLNVPETNENLIYLPTLLIKEG

Sequences:
NA

Specific function: NA

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA