| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156938185
Identifier: 156938185
GI number: 156938185
Start: 1257942
End: 1258544
Strand: Direct
Name: 156938185
Synonym: Igni_1398
Alternate gene names: NA
Gene position: 1257942-1258544 (Clockwise)
Preceding gene: 156938184
Following gene: 156938188
Centisome position: 96.95
GC content: 53.23
Gene sequence:
>603_bases TTGGGGAACGTGCGCGACGTAATATTAATGACATTATTGGTCACGCCGAGCGGGGCCTTCAGTCCGGGCCTCCTCTCAGC CAGCGCGGTGGCGGCGGGAGCGGGTAGCGGCGTCTTAGGGGGGATTGCAGTAGCGACCGGGCACGTACTCTTCGAACTCC CTTACGTCTTCTTGTTAACTAAGACTTTGGGGAAGGTTAAGAATGTCTTAGATAAGTACAATAAAGTCCTAGCTCTGGTG GTTTTCGCCTTCGCGCTGTTCTTCGCAAAAGGACTCTTGGAGAGCCCCGACATGCCGAAGGTTACTGTCAACGATGCTCT GATGGCGGGGTTTGTCTTCACAGCGTTTAACGCCTACTTCTTGTTGTGGTGGGTAACAGTAGGCCTCCCGCTGGTCGAGG CCGCGTCGCTGAGCACAACCACCTTCGTTGCTATGTACTTATCGCACGTGTGGATGGATTACGTCTGGTTAGCTGCGCTG GCGGCTTTGGGTGGCAGCGTGGCCAACTTCACTCTAATAAATTACATACTGGCAGCCTTGTTAATGCTCTTCGCCGTAGA CGTAGTCACGAAGAGCTTTTTTGGAAAAGGTATTTTGCCGTGA
Upstream 100 bases:
>100_bases CCGCCGAGAAGGTCGATAAGGTCGTGAGAGAAGCCATGATTGTTATTTATGACAACGTGGAGAAGCTCCGATTGGAAATT CCTAAGAGGGGATAAGACCC
Downstream 100 bases:
>100_bases AGCCCGGGGATGACGTCTAGCTGGATTGGCTGAAGGGGATGATGACGGTTTCGGGTCATGACCCTAACAATTCACCATAT TCCTTTATCTCGAGTCGGGC
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGNVRDVILMTLLVTPSGAFSPGLLSASAVAAGAGSGVLGGIAVATGHVLFELPYVFLLTKTLGKVKNVLDKYNKVLALV VFAFALFFAKGLLESPDMPKVTVNDALMAGFVFTAFNAYFLLWWVTVGLPLVEAASLSTTTFVAMYLSHVWMDYVWLAAL AALGGSVANFTLINYILAALLMLFAVDVVTKSFFGKGILP
Sequences:
>Translated_200_residues MGNVRDVILMTLLVTPSGAFSPGLLSASAVAAGAGSGVLGGIAVATGHVLFELPYVFLLTKTLGKVKNVLDKYNKVLALV VFAFALFFAKGLLESPDMPKVTVNDALMAGFVFTAFNAYFLLWWVTVGLPLVEAASLSTTTFVAMYLSHVWMDYVWLAAL AALGGSVANFTLINYILAALLMLFAVDVVTKSFFGKGILP >Mature_199_residues GNVRDVILMTLLVTPSGAFSPGLLSASAVAAGAGSGVLGGIAVATGHVLFELPYVFLLTKTLGKVKNVLDKYNKVLALVV FAFALFFAKGLLESPDMPKVTVNDALMAGFVFTAFNAYFLLWWVTVGLPLVEAASLSTTTFVAMYLSHVWMDYVWLAALA ALGGSVANFTLINYILAALLMLFAVDVVTKSFFGKGILP
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21195; Mature: 21063
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVRDVILMTLLVTPSGAFSPGLLSASAVAAGAGSGVLGGIAVATGHVLFELPYVFLLT CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KTLGKVKNVLDKYNKVLALVVFAFALFFAKGLLESPDMPKVTVNDALMAGFVFTAFNAYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH LLWWVTVGLPLVEAASLSTTTFVAMYLSHVWMDYVWLAALAALGGSVANFTLINYILAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LMLFAVDVVTKSFFGKGILP HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GNVRDVILMTLLVTPSGAFSPGLLSASAVAAGAGSGVLGGIAVATGHVLFELPYVFLLT CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KTLGKVKNVLDKYNKVLALVVFAFALFFAKGLLESPDMPKVTVNDALMAGFVFTAFNAYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH LLWWVTVGLPLVEAASLSTTTFVAMYLSHVWMDYVWLAALAALGGSVANFTLINYILAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LMLFAVDVVTKSFFGKGILP HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA