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The map label for this gene is amzA [H]

Identifier: 156938157

GI number: 156938157

Start: 1226539

End: 1227078

Strand: Reverse

Name: amzA [H]

Synonym: Igni_1370

Alternate gene names: 156938157

Gene position: 1227078-1226539 (Counterclockwise)

Preceding gene: 156938159

Following gene: 156938151

Centisome position: 94.57

GC content: 56.67

Gene sequence:

>540_bases
TTGAAGGTACTGCTCCGGAGGGTGGGCGACGTCTCCACGGAAGCGCTCGTGAGGGCGAAAGAGGCAATAATTAGGGAGAC
CGGCTTGCCCGTCCTAATAGACTACCACAAGCTTCAACCCAACCTCGAGGCTTACAATTGGAAGAGGAGGCAGTACTTGG
CCTCGGAGCTGTTAAAGACCTTGGGGAGGGTTGACGGGTTCTTAACCTTATACCTCATAGACGCGGACGGCTACGAGGAG
GGCCTCAACTTCGTCTTTGGGGTAGCGCTCCCGGCCCTCGGGGTGGGAGGGGTCTTCCTAGCGAGGTTGAGGAACGAGTT
CTACGGCTGGCTCCCGGACGAGGAGAAGTTCTTGAAAAGAGTAGAAAAGGAAGTCCTACACGAGCTGGGCCACCTGCTGG
GCCTCCCCCACTGCCCCAACCCTAGGTGCGTTATGAGCTTCTCTAACTCAATACTAGAGGTGGACGAGAAGGAGGCGGCG
TTTTGTGAGGTGTGCAAAAAGAGGTTAATGAGCAGGCTTGCTGGGAGCGGGGGCTATTAG

Upstream 100 bases:

>100_bases
CACCGCGTAGGGCGAGCCCTCCTCTAGCCGCCCGCCGAAGACCAAGGGGGGTTGAGCCATTATACTCTCCCACGACGAAG
GGGACGAAGGGACGGGAACT

Downstream 100 bases:

>100_bases
CTTGTCCACCAAGTACTCGGATATGTGCTTCACTTGCACGTCTTCTATGCCGTAGTCCTTGCCGTGCCAATTTATCCCTC
TCTGTATGGTCTCTATGCAC

Product: peptidase, zinc-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKVLLRRVGDVSTEALVRAKEAIIRETGLPVLIDYHKLQPNLEAYNWKRRQYLASELLKTLGRVDGFLTLYLIDADGYEE
GLNFVFGVALPALGVGGVFLARLRNEFYGWLPDEEKFLKRVEKEVLHELGHLLGLPHCPNPRCVMSFSNSILEVDEKEAA
FCEVCKKRLMSRLAGSGGY

Sequences:

>Translated_179_residues
MKVLLRRVGDVSTEALVRAKEAIIRETGLPVLIDYHKLQPNLEAYNWKRRQYLASELLKTLGRVDGFLTLYLIDADGYEE
GLNFVFGVALPALGVGGVFLARLRNEFYGWLPDEEKFLKRVEKEVLHELGHLLGLPHCPNPRCVMSFSNSILEVDEKEAA
FCEVCKKRLMSRLAGSGGY
>Mature_179_residues
MKVLLRRVGDVSTEALVRAKEAIIRETGLPVLIDYHKLQPNLEAYNWKRRQYLASELLKTLGRVDGFLTLYLIDADGYEE
GLNFVFGVALPALGVGGVFLARLRNEFYGWLPDEEKFLKRVEKEVLHELGHLLGLPHCPNPRCVMSFSNSILEVDEKEAA
FCEVCKKRLMSRLAGSGGY

Specific function: Probable zinc metalloprotease [H]

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012962
- InterPro:   IPR012091 [H]

Pfam domain/function: PF07998 Peptidase_M54 [H]

EC number: NA

Molecular weight: Translated: 20241; Mature: 20241

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLRRVGDVSTEALVRAKEAIIRETGLPVLIDYHKLQPNLEAYNWKRRQYLASELLKT
CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHH
LGRVDGFLTLYLIDADGYEEGLNFVFGVALPALGVGGVFLARLRNEFYGWLPDEEKFLKR
HHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VEKEVLHELGHLLGLPHCPNPRCVMSFSNSILEVDEKEAAFCEVCKKRLMSRLAGSGGY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKVLLRRVGDVSTEALVRAKEAIIRETGLPVLIDYHKLQPNLEAYNWKRRQYLASELLKT
CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHH
LGRVDGFLTLYLIDADGYEEGLNFVFGVALPALGVGGVFLARLRNEFYGWLPDEEKFLKR
HHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VEKEVLHELGHLLGLPHCPNPRCVMSFSNSILEVDEKEAAFCEVCKKRLMSRLAGSGGY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA