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The map label for this gene is amt [H]

Identifier: 156938080

GI number: 156938080

Start: 1147434

End: 1148657

Strand: Direct

Name: amt [H]

Synonym: Igni_1293

Alternate gene names: 156938080

Gene position: 1147434-1148657 (Clockwise)

Preceding gene: 156938077

Following gene: 156938081

Centisome position: 88.43

GC content: 60.29

Gene sequence:

>1224_bases
GTGAGCGGCCTTAACGCGGGCGACGTGGCTTGGGTACTGAGCGCAACCTCAATGGTCTTGTTCATGAGCGTAAGCGGCTT
GGCCGCGTTTTACGGAGGCCTCGTGAGGGATAGGAACGTCCTCTCGACCATGCTACACGTCCTCCTCGCGTTCTCCACAG
GGCTCATAGCGTGGACTCTCTTCGGCTTCAGCGTAGCCTTCGGGAAGGACCTCTACGGCCTGATAGGCAACCCCCTCCAA
TACTTCGCCTTGCTGCCTAACTCCTTACCAAAGGTTTGGCCCGGGACCGACATCCCCGCCTCCTTGTTCGCGGCCTTCCA
AGGGATGTTCGCCTCAATAGCAGTGGCAATAATCGCCTCCGCTATAGCGGAGAGGGGCAAAGTTGAGGCGTGGATCGCCT
TCAGCTTCTTGTGGACCTTATTGGTCTACAGCGTAATAGCCCACTGGGTCTGGGGAGGAGGTTGGCTCTCCTCGATGGAC
GCGTTGGACTTCGCCGGGGGGCTGGTAGTACACATAAGCTCCGGCTTCTCCGCACTGGTGTTGAGCCTCATAATAGGTAA
AAGGAAGTTCATAAAGAGAGTGGAGCCTGTCCCCCACAACATACCGCTGGTCTTGTTGGGCGCGGGAGCCTTGTGGTTCG
GCTGGTTGGGCTTTAACGCCGGGAGCGCCCTCGCCGCGAACCAAGACGCTGCCAACGCGTTACTCGTGAGCGCCTTGGCC
GCCGCCGCGGGAGGTCTCGCGTGGGTTTACTTGGATCTCAGGGAGAACGGAATATCCAGCAGCGTCGGCTTCGCGTCCGG
CGTCGTGGCCGGGCTGGTCGCGATAACTCCGGCGGCCGGTTACGTGGACCCCCTAGGGGCCCTCGTCATAGGGGCCTTGG
CCTCGGTGGTCAGCTACAACGCCGTAAAGTTCAGGATAGCTAAGGGCTGGGACGAGACGTTGGATGCTTGGGCAGTTCAC
GGGATGAGCGGCGTCTGGGGTTCTATCGCAACCGGCATCTTCGCCAACCCCCTAGTAGGGGGCAGGGCGGGCCTGCTCTT
CGGCGACCCTTACCAACTGGTAGTCCAGATACTCAGCACGGTCGTAAGCATAGCTTACTCCGTCGCCGCTACCTACGTAT
TAGCGACTCTGATAGACAAGGTCGTGGGCTGGAGGGTGCCGGAGGAAGTGGAGAGGATAGGCCTCGACGTGTCGGAGCTC
GGAGAGGAGGCCTACGTCATCTAA

Upstream 100 bases:

>100_bases
GTTCTAGAGGAATTAGATTGATTGAAACAATATTCCACAATATTGCCCAAATTGTTATGATTATGTTCACTCGTCGTCGT
AGCTCGGGTGAAACGGAAAG

Downstream 100 bases:

>100_bases
GGGGGTGGCCGGGATGACGAAGCTAATAATTGCATTCATAAGGCCTGAGAAGTTGGAAGACGTAAAGGACGAGCTCGAGA
AGGTCGGGATATACCCGATG

Product: ammonium transporter

Products: NH3 [Cytoplasm] [C]

Alternate protein names: Ammonia transporter [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSGLNAGDVAWVLSATSMVLFMSVSGLAAFYGGLVRDRNVLSTMLHVLLAFSTGLIAWTLFGFSVAFGKDLYGLIGNPLQ
YFALLPNSLPKVWPGTDIPASLFAAFQGMFASIAVAIIASAIAERGKVEAWIAFSFLWTLLVYSVIAHWVWGGGWLSSMD
ALDFAGGLVVHISSGFSALVLSLIIGKRKFIKRVEPVPHNIPLVLLGAGALWFGWLGFNAGSALAANQDAANALLVSALA
AAAGGLAWVYLDLRENGISSSVGFASGVVAGLVAITPAAGYVDPLGALVIGALASVVSYNAVKFRIAKGWDETLDAWAVH
GMSGVWGSIATGIFANPLVGGRAGLLFGDPYQLVVQILSTVVSIAYSVAATYVLATLIDKVVGWRVPEEVERIGLDVSEL
GEEAYVI

Sequences:

>Translated_407_residues
MSGLNAGDVAWVLSATSMVLFMSVSGLAAFYGGLVRDRNVLSTMLHVLLAFSTGLIAWTLFGFSVAFGKDLYGLIGNPLQ
YFALLPNSLPKVWPGTDIPASLFAAFQGMFASIAVAIIASAIAERGKVEAWIAFSFLWTLLVYSVIAHWVWGGGWLSSMD
ALDFAGGLVVHISSGFSALVLSLIIGKRKFIKRVEPVPHNIPLVLLGAGALWFGWLGFNAGSALAANQDAANALLVSALA
AAAGGLAWVYLDLRENGISSSVGFASGVVAGLVAITPAAGYVDPLGALVIGALASVVSYNAVKFRIAKGWDETLDAWAVH
GMSGVWGSIATGIFANPLVGGRAGLLFGDPYQLVVQILSTVVSIAYSVAATYVLATLIDKVVGWRVPEEVERIGLDVSEL
GEEAYVI
>Mature_406_residues
SGLNAGDVAWVLSATSMVLFMSVSGLAAFYGGLVRDRNVLSTMLHVLLAFSTGLIAWTLFGFSVAFGKDLYGLIGNPLQY
FALLPNSLPKVWPGTDIPASLFAAFQGMFASIAVAIIASAIAERGKVEAWIAFSFLWTLLVYSVIAHWVWGGGWLSSMDA
LDFAGGLVVHISSGFSALVLSLIIGKRKFIKRVEPVPHNIPLVLLGAGALWFGWLGFNAGSALAANQDAANALLVSALAA
AAGGLAWVYLDLRENGISSSVGFASGVVAGLVAITPAAGYVDPLGALVIGALASVVSYNAVKFRIAKGWDETLDAWAVHG
MSGVWGSIATGIFANPLVGGRAGLLFGDPYQLVVQILSTVVSIAYSVAATYVLATLIDKVVGWRVPEEVERIGLDVSELG
EEAYVI

Specific function: Involved in the uptake of ammonia [H]

COG id: COG0004

COG function: function code P; Ammonia permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI1786656, Length=406, Percent_Identity=41.871921182266, Blast_Score=268, Evalue=4e-73,
Organism=Caenorhabditis elegans, GI17550182, Length=442, Percent_Identity=25.3393665158371, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI32564042, Length=429, Percent_Identity=28.2051282051282, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17550180, Length=434, Percent_Identity=25.5760368663594, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI133931100, Length=423, Percent_Identity=28.3687943262411, Blast_Score=108, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6325396, Length=413, Percent_Identity=36.5617433414044, Blast_Score=229, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6321559, Length=409, Percent_Identity=35.2078239608802, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6324187, Length=417, Percent_Identity=35.2517985611511, Blast_Score=213, Evalue=3e-56,
Organism=Drosophila melanogaster, GI161078314, Length=413, Percent_Identity=32.9297820823245, Blast_Score=162, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 42585; Mature: 42454

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS01219 AMMONIUM_TRANSP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLNAGDVAWVLSATSMVLFMSVSGLAAFYGGLVRDRNVLSTMLHVLLAFSTGLIAWTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FGFSVAFGKDLYGLIGNPLQYFALLPNSLPKVWPGTDIPASLFAAFQGMFASIAVAIIAS
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIAERGKVEAWIAFSFLWTLLVYSVIAHWVWGGGWLSSMDALDFAGGLVVHISSGFSALV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHH
LSLIIGKRKFIKRVEPVPHNIPLVLLGAGALWFGWLGFNAGSALAANQDAANALLVSALA
HHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AAAGGLAWVYLDLRENGISSSVGFASGVVAGLVAITPAAGYVDPLGALVIGALASVVSYN
HHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
AVKFRIAKGWDETLDAWAVHGMSGVWGSIATGIFANPLVGGRAGLLFGDPYQLVVQILST
HHEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHH
VVSIAYSVAATYVLATLIDKVVGWRVPEEVERIGLDVSELGEEAYVI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCCCC
>Mature Secondary Structure 
SGLNAGDVAWVLSATSMVLFMSVSGLAAFYGGLVRDRNVLSTMLHVLLAFSTGLIAWTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FGFSVAFGKDLYGLIGNPLQYFALLPNSLPKVWPGTDIPASLFAAFQGMFASIAVAIIAS
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIAERGKVEAWIAFSFLWTLLVYSVIAHWVWGGGWLSSMDALDFAGGLVVHISSGFSALV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHH
LSLIIGKRKFIKRVEPVPHNIPLVLLGAGALWFGWLGFNAGSALAANQDAANALLVSALA
HHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AAAGGLAWVYLDLRENGISSSVGFASGVVAGLVAITPAAGYVDPLGALVIGALASVVSYN
HHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
AVKFRIAKGWDETLDAWAVHGMSGVWGSIATGIFANPLVGGRAGLLFGDPYQLVVQILST
HHEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHH
VVSIAYSVAATYVLATLIDKVVGWRVPEEVERIGLDVSELGEEAYVI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NH3 [Periplasm] [C]

Specific reaction: NH3 [Periplasm] = NH3 [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]