| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938027
Identifier: 156938027
GI number: 156938027
Start: 1101301
End: 1102104
Strand: Reverse
Name: 156938027
Synonym: Igni_1240
Alternate gene names: NA
Gene position: 1102104-1101301 (Counterclockwise)
Preceding gene: 156938028
Following gene: 156938024
Centisome position: 84.94
GC content: 47.64
Gene sequence:
>804_bases TTGAGCAATGAGGACTCGGGAGGGAGTGGGTCGAGCGCGAACGAACTCACGAAACTCGACAACCTCCTAAAGGTATTACC GAGGCCAAAGGAGGGCAAAGGCAAGTGTGAAGAGAAGGGCGTCAATGAGGTAAGCCCCTCAGAGCTGCTAAAAGATTTGG CGAAGGGGCTCTCGAACAACTTGTTTGAGGGTGAGGACGTCTGCAAGGACGACCCGAAGAGGTTCTTGGAGAAGTTCTTA AGGGAGGTATTAAATAAGACTGTACATGAAGCCGGGATAGACCCTAACGATCTAGAGAAGAGTTTACATAAAGAACTACG GGACAGTGGAAAGGGCCAAGATGATTGCACCGTGATCTTGAAGGATTTATTGGAAAAATTGAAGGAGAATTGGGATACCA TTGATAGAGAGAAAAAGTCTAAGCTCAATAAAATCCTACACCTGTTCAACACTTGCTACGATGATGGAAAGGCCCAGGGA CTTTCTCAAGCTTTAAGTGACGTGAAGGAGTGCATCGATAATCAAGAGCTGTTCTGCAAGTTCTTGCTCCTAGCGGCCGC CGTCACCTACCTGAAGAGCGAGGAAAAGCTGGATTCCAGGTCGGAGTGGTTCTACGAGGTCGTTAGGGCGGCCCTCACGA GGGACAAATTCAGGTTCCCCTACTGTCCGTGGAAGGGCGACGCGGCGGCGCTGTTCTACGCCTATGTCCTATGTTGTTGT GGGATTAATATTAATGATGAGGCTAAAATCACTGGAGACGACATAATCAAAATAATAAAACTCTTGATAGGAAAGGAGAT TTAA
Upstream 100 bases:
>100_bases GGCTGTGCGAGCGAAGTCCGGACGCGCTTGGCTAATTTGATCCACAGCTTGTGAGAACGAATAAATAACGGCCACCTTCC GTCTCAAATGGCGAGAAGGG
Downstream 100 bases:
>100_bases GGCATCTAATCGGAATTTCCACAGTAGATAAACACAATCGCGAAGTCTTTAACAGCTTAGCGTCGCTGCAAGCCTTTGAG AGAACCCTCCAAGGAGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSNEDSGGSGSSANELTKLDNLLKVLPRPKEGKGKCEEKGVNEVSPSELLKDLAKGLSNNLFEGEDVCKDDPKRFLEKFL REVLNKTVHEAGIDPNDLEKSLHKELRDSGKGQDDCTVILKDLLEKLKENWDTIDREKKSKLNKILHLFNTCYDDGKAQG LSQALSDVKECIDNQELFCKFLLLAAAVTYLKSEEKLDSRSEWFYEVVRAALTRDKFRFPYCPWKGDAAALFYAYVLCCC GININDEAKITGDDIIKIIKLLIGKEI
Sequences:
>Translated_267_residues MSNEDSGGSGSSANELTKLDNLLKVLPRPKEGKGKCEEKGVNEVSPSELLKDLAKGLSNNLFEGEDVCKDDPKRFLEKFL REVLNKTVHEAGIDPNDLEKSLHKELRDSGKGQDDCTVILKDLLEKLKENWDTIDREKKSKLNKILHLFNTCYDDGKAQG LSQALSDVKECIDNQELFCKFLLLAAAVTYLKSEEKLDSRSEWFYEVVRAALTRDKFRFPYCPWKGDAAALFYAYVLCCC GININDEAKITGDDIIKIIKLLIGKEI >Mature_266_residues SNEDSGGSGSSANELTKLDNLLKVLPRPKEGKGKCEEKGVNEVSPSELLKDLAKGLSNNLFEGEDVCKDDPKRFLEKFLR EVLNKTVHEAGIDPNDLEKSLHKELRDSGKGQDDCTVILKDLLEKLKENWDTIDREKKSKLNKILHLFNTCYDDGKAQGL SQALSDVKECIDNQELFCKFLLLAAAVTYLKSEEKLDSRSEWFYEVVRAALTRDKFRFPYCPWKGDAAALFYAYVLCCCG ININDEAKITGDDIIKIIKLLIGKEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30103; Mature: 29971
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEDSGGSGSSANELTKLDNLLKVLPRPKEGKGKCEEKGVNEVSPSELLKDLAKGLSNN CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC LFEGEDVCKDDPKRFLEKFLREVLNKTVHEAGIDPNDLEKSLHKELRDSGKGQDDCTVIL CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH KDLLEKLKENWDTIDREKKSKLNKILHLFNTCYDDGKAQGLSQALSDVKECIDNQELFCK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH FLLLAAAVTYLKSEEKLDSRSEWFYEVVRAALTRDKFRFPYCPWKGDAAALFYAYVLCCC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH GININDEAKITGDDIIKIIKLLIGKEI CCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SNEDSGGSGSSANELTKLDNLLKVLPRPKEGKGKCEEKGVNEVSPSELLKDLAKGLSNN CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC LFEGEDVCKDDPKRFLEKFLREVLNKTVHEAGIDPNDLEKSLHKELRDSGKGQDDCTVIL CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH KDLLEKLKENWDTIDREKKSKLNKILHLFNTCYDDGKAQGLSQALSDVKECIDNQELFCK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH FLLLAAAVTYLKSEEKLDSRSEWFYEVVRAALTRDKFRFPYCPWKGDAAALFYAYVLCCC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH GININDEAKITGDDIIKIIKLLIGKEI CCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA