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The map label for this gene is sufB [C]

Identifier: 156938007

GI number: 156938007

Start: 1086183

End: 1087499

Strand: Direct

Name: sufB [C]

Synonym: Igni_1220

Alternate gene names: 156938007

Gene position: 1086183-1087499 (Clockwise)

Preceding gene: 156938006

Following gene: 156938008

Centisome position: 83.71

GC content: 58.39

Gene sequence:

>1317_bases
ATGAACGAGGTCCAGATAATTAAGTACTACGCGGAAGAGATATCCAAGAAACTGAAGGAGCCCGAGTGGGCGCTGAGGCT
CAGACTGAAGGCTGCAGAGCTCTACCCAAAGGTCCCAGCGCCGCCGTGGATGCCCGAAGACTTCGACTTGGAGGCCTTCG
CCGCTAAAGCGGCGGAGGAGGAGTTCGTGAAGCCCGGGGAGGGCGAGATACCGGACTGGTACAAGGCCTTACTCGAGAGG
ATAGGAGTGCCGGACATAGAGCAGAGCGCGCTGGCCGGAGTTACGGTGATGGTTAACGAGAACGTGGTCTATGAGGCGCA
GAAGAGGGACCTCATGAGGAAGGGAGTGATACTCAAATCGATGGACGAGGCCGTGAGGGAACACGAGGAATTCGTGAAGG
AGAGGCTCCACTCCGCCCAGAGGCCGGAGGCCCACAAGCTGGCCGCCCTCCACGCCGCCCTCCGGAGGGGAGGGACCTTC
ATGTACGTCCCGCCGAGGGTCAGGGTACCCTTCCCGGTCCAAGCGTTCTTCGTGATAACGGAGGAACAACTGGCACAGAC
GGAACACACCATGATAATAGCAGACGAGGGAAGCTACGTACACTTCATAGAGGGCTGTATAGTCCCCATCCCGGCGCCCT
TCAGCGTACACTTGGGCGGCAGCGAGTTCTTCGTTGAGAGGGGCGCTAGGCTGAGGGTCTCCAGCCTCCAAGACTGGCTG
GGCGACGTAGTACACGTGCCGGTCAAGGGCGCGATAGTGAAGGAGAGGGGAACTCTGGAAGAGCTCGGGGTGAGCTTCGG
AGGGACCAAGATAGGCATGAGGCCCACCATAAGGTTGGTCGGCGAGGGGGCCAAGCTCTCCTTCAACAACGTAGCGCTAC
TAAAGAAGGAGATGAGGTCTTGGAGCGGCTCCTTCGTTAAGATGGAGGCTCCGAGGACCAGCGCCACTGTAATAAATAGG
AGCGTGATGCTGGACAAGTCCTTCGAGGAGTTCTTGGGCGAGATAGACGTGGAGAGGGGGGCGAAGGGAGTAAAGGGCTA
TCAGTCTTGTAACACCCTCCTGCTGAGCGACGAAGCCACTAACGTGACCATACCGAAGCTCGTAAGCAAGACGTCCGACG
CTGAGCTGGCGCACGAGGGCACGGTAGGGAAGCTCGGCGAGGAACAGCTGTTCTACTTGAGGTCCATGGGCTTCACCGAG
CCCGAGGCTGTACAGATGCTAACCATAGGCTTCATAGACCCGCTCGTGAAGGACTTACCTAGCGACTACGTCAGGGCAAT
AAGGGAGATAGTTAAGATGACCCTCAACGCCTCGTGA

Upstream 100 bases:

>100_bases
CCCATCTGGTCCACGTTATGATAGACGGGAGGATAGTCAAGAGCGGGGGGCCCGAGATCCTCGAAGTTATTGAAGAAAAG
GGCTTCGCGGGGGTGGTAGC

Downstream 100 bases:

>100_bases
GGCTCCAACCTTTATTATTTTTGTTCCTAAGTAGGACCCCGGAAGGGAGTATGCCCGAAGAGGAGAAGAAGGAGGAAGTA
AAGGAACAAGAGCAACAGAA

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MNEVQIIKYYAEEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPEDFDLEAFAAKAAEEEFVKPGEGEIPDWYKALLER
IGVPDIEQSALAGVTVMVNENVVYEAQKRDLMRKGVILKSMDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTF
MYVPPRVRVPFPVQAFFVITEEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERGARLRVSSLQDWL
GDVVHVPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSFNNVALLKKEMRSWSGSFVKMEAPRTSATVINR
SVMLDKSFEEFLGEIDVERGAKGVKGYQSCNTLLLSDEATNVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTE
PEAVQMLTIGFIDPLVKDLPSDYVRAIREIVKMTLNAS

Sequences:

>Translated_438_residues
MNEVQIIKYYAEEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPEDFDLEAFAAKAAEEEFVKPGEGEIPDWYKALLER
IGVPDIEQSALAGVTVMVNENVVYEAQKRDLMRKGVILKSMDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTF
MYVPPRVRVPFPVQAFFVITEEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERGARLRVSSLQDWL
GDVVHVPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSFNNVALLKKEMRSWSGSFVKMEAPRTSATVINR
SVMLDKSFEEFLGEIDVERGAKGVKGYQSCNTLLLSDEATNVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTE
PEAVQMLTIGFIDPLVKDLPSDYVRAIREIVKMTLNAS
>Mature_438_residues
MNEVQIIKYYAEEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPEDFDLEAFAAKAAEEEFVKPGEGEIPDWYKALLER
IGVPDIEQSALAGVTVMVNENVVYEAQKRDLMRKGVILKSMDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTF
MYVPPRVRVPFPVQAFFVITEEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERGARLRVSSLQDWL
GDVVHVPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSFNNVALLKKEMRSWSGSFVKMEAPRTSATVINR
SVMLDKSFEEFLGEIDVERGAKGVKGYQSCNTLLLSDEATNVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTE
PEAVQMLTIGFIDPLVKDLPSDYVRAIREIVKMTLNAS

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=452, Percent_Identity=26.1061946902655, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1787971, Length=205, Percent_Identity=24.390243902439, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 48902; Mature: 48902

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVQIIKYYAEEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPEDFDLEAFAAKAAEE
CCCHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
EFVKPGEGEIPDWYKALLERIGVPDIEQSALAGVTVMVNENVVYEAQKRDLMRKGVILKS
HHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCEEEEEECCEEEHHHHHHHHHHCHHHHH
MDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTFMYVPPRVRVPFPVQAFFVIT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEE
EEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERGARLRVSSLQDWL
HHHHHCCCCEEEEECCCCEEEEECCEEEECCCCCEEEECCHHHHHHCCCEEEHHHHHHHH
GDVVHVPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSFNNVALLKKEMRS
HHEEECCCCCEEECCCCCHHHHCCCCCCCEECCCCEEEEEECCCEEECCHHHHHHHHHHH
WSGSFVKMEAPRTSATVINRSVMLDKSFEEFLGEIDVERGAKGVKGYQSCNTLLLSDEAT
CCCCEEEEECCCCHHHHHHHHHEECCHHHHHHHHHCHHHCCCCCCCHHHCCEEEEECCCC
NVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTEPEAVQMLTIGFIDPLVKDLP
CCCHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
SDYVRAIREIVKMTLNAS
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEVQIIKYYAEEISKKLKEPEWALRLRLKAAELYPKVPAPPWMPEDFDLEAFAAKAAEE
CCCHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
EFVKPGEGEIPDWYKALLERIGVPDIEQSALAGVTVMVNENVVYEAQKRDLMRKGVILKS
HHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCEEEEEECCEEEHHHHHHHHHHCHHHHH
MDEAVREHEEFVKERLHSAQRPEAHKLAALHAALRRGGTFMYVPPRVRVPFPVQAFFVIT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEE
EEQLAQTEHTMIIADEGSYVHFIEGCIVPIPAPFSVHLGGSEFFVERGARLRVSSLQDWL
HHHHHCCCCEEEEECCCCEEEEECCEEEECCCCCEEEECCHHHHHHCCCEEEHHHHHHHH
GDVVHVPVKGAIVKERGTLEELGVSFGGTKIGMRPTIRLVGEGAKLSFNNVALLKKEMRS
HHEEECCCCCEEECCCCCHHHHCCCCCCCEECCCCEEEEEECCCEEECCHHHHHHHHHHH
WSGSFVKMEAPRTSATVINRSVMLDKSFEEFLGEIDVERGAKGVKGYQSCNTLLLSDEAT
CCCCEEEEECCCCHHHHHHHHHEECCHHHHHHHHHCHHHCCCCCCCHHHCCEEEEECCCC
NVTIPKLVSKTSDAELAHEGTVGKLGEEQLFYLRSMGFTEPEAVQMLTIGFIDPLVKDLP
CCCHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
SDYVRAIREIVKMTLNAS
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA