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The map label for this gene is rpl34e [H]

Identifier: 156937984

GI number: 156937984

Start: 1066899

End: 1067174

Strand: Reverse

Name: rpl34e [H]

Synonym: Igni_1197

Alternate gene names: 156937984

Gene position: 1067174-1066899 (Counterclockwise)

Preceding gene: 156937985

Following gene: 156937983

Centisome position: 82.25

GC content: 60.87

Gene sequence:

>276_bases
ATGGTAAGGCCCGCGTACCGCTCTCGCAGCAGGAGGAGGGTCTACAAGAGGACCCCCGGGGGCAAGACTGTAGTTCACTT
CGAGAAGAGGAAGCCTAAGGCGGCGAGGTGCGCGATCTGCGGGAGGCCCTTGGGAGGGGTCCCCAGGGGAAGGCCGGTGG
AGATAAGGAAGCTCTCCAAGACCGAGAGGAGGCCGGAGAGGCCTTACGGCGGCTACATATGCCACGCGTGCCTCATGAAG
TTTTATAAGTACGCGGTAAGCAAGATGGTGCAGTAG

Upstream 100 bases:

>100_bases
CTACAACCGCCAAGGGGCGGTGGAGGAGGCGGCGGCGAAGTTCGTGGAGGCCGTGGAGAAGATATAAGGCCTTGAGGGGA
GCGCGAGGGGGGTTAAGTAA

Downstream 100 bases:

>100_bases
TTTTTTGCGTTGATGAGGACGGTCGGCATCTCCGATCGGTGAGGTCCTCAGATCACCGGCGCCGAAGCGTGTGCCCCGCC
GGTAACTCCCCGCCTCATCG

Product: 50S ribosomal protein L34E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MVRPAYRSRSRRRVYKRTPGGKTVVHFEKRKPKAARCAICGRPLGGVPRGRPVEIRKLSKTERRPERPYGGYICHACLMK
FYKYAVSKMVQ

Sequences:

>Translated_91_residues
MVRPAYRSRSRRRVYKRTPGGKTVVHFEKRKPKAARCAICGRPLGGVPRGRPVEIRKLSKTERRPERPYGGYICHACLMK
FYKYAVSKMVQ
>Mature_91_residues
MVRPAYRSRSRRRVYKRTPGGKTVVHFEKRKPKAARCAICGRPLGGVPRGRPVEIRKLSKTERRPERPYGGYICHACLMK
FYKYAVSKMVQ

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008195
- InterPro:   IPR018065 [H]

Pfam domain/function: PF01199 Ribosomal_L34e [H]

EC number: NA

Molecular weight: Translated: 10581; Mature: 10581

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: PS01145 RIBOSOMAL_L34E ; PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPAYRSRSRRRVYKRTPGGKTVVHFEKRKPKAARCAICGRPLGGVPRGRPVEIRKLSK
CCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHH
TERRPERPYGGYICHACLMKFYKYAVSKMVQ
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRPAYRSRSRRRVYKRTPGGKTVVHFEKRKPKAARCAICGRPLGGVPRGRPVEIRKLSK
CCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHH
TERRPERPYGGYICHACLMKFYKYAVSKMVQ
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA