| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156937961
Identifier: 156937961
GI number: 156937961
Start: 1047372
End: 1048745
Strand: Reverse
Name: 156937961
Synonym: Igni_1173
Alternate gene names: NA
Gene position: 1048745-1047372 (Counterclockwise)
Preceding gene: 156937962
Following gene: 156937960
Centisome position: 80.83
GC content: 57.79
Gene sequence:
>1374_bases ATGAGCTCTCCTCAGAAAGTCCAAATAAACAAGAAGCTCTTAGTGTTGGCCTCCGTCGCGGTCGCGGTGATAGCCGGCCT CGGCATAACCTTCCTCGTGCTGAGCAGCAAACCGCCCAAGGCGGAGGTCACCCAGCAAGAGCGCTTCGGCGCCCCCGCCG AGGAGGTGCCTAAGGTAAGCGTCGAGTACCCCCTCGAGTTCGTGGAGCTCGAGGGGGCGGCCACCGCCCAGCCCTTAACC TACCCGGACGAGGACGGCACGGCGTTCCTCTTCGTGAACACTATAAACGAGACTCAGGAGATATGGACCATAAAGGGTAA CAAGGTAGTGGGCAAGTTTGAGATAAAGGGCCCGGTGGTGCCGGTCTTCGACCCTAGGAAGGGGGAGTCCGCCACCCTCG ACGGGAAGCTCCTCCTCGGCGTCAACGGCACGCTGTACGCGATATACGGGGACGAGGCCGAGCCCTTGGGCAAGTACGCC CACTCCCCCGACGCCCGCGTAGGCATCTTCGTTAAGAAGAACGACGTCTACGCTTGGGAGGTGAGGGAGGAGAAGCTCGG CAACGACACTTGGGTCTACTGCACCCTGTACGACGTGCTCAAGGACAAGGTGGCCTCGAACATAACCTTCAACTTGGGCG CCAACGTTAGCGCCACCAACCCGTTGCCTGACTTGTTGGACGGGGACGGCTGTTTGGTCTTGTGGTTGAGGAAGATGTCG CCGATAATGTATTACCACTACAAGGGCAAGGGAGGGGAGGCGAAGGGCGAGGAAGACTTAATTAAGATGAAGGTCGCCAC GTTCGCCCCCATATTCTTGGAGAACGAGCCCTACTCGAGCAAGCCCTACTTCATGCTGATAAGCTTGGGCGAGAGGGGAA CTTTCGTGCTGAGGTTCCACGACATATTGGACAACGAGACCGTGCTCTACTCCTTGCCCGGCATATACAACTTCGTAGGG GTGGGGGACTACTTGGGCAACGGCTACGTGGGCGACGCCCTCTTCTTGGTCGCCACTAGGAGGGGCTTCGAGGCCTACAT ATTCGACGTTAACAACATGTATCAGAACTTCACCATAGGCAAGCTGGAGCCCGCGGTTGCGGTGGCCACCGGGATATCCT TGGAGCCCAAGGTAAAGAGGGTGTTCGGCTTGGGCAACTTCACCAACACCACCATTACTATAAAGAGCAACGTCGGCGAG CTGAAGTTCAAGGTGAAGAACGTGCCCCAAGAGGTCTCTTCGCTGTTCATAACCTTAACTATGGGCAAGAGGACGTGTTA CACGGCTGTAGTGAACCCCACGGTGGGCGGGCTGACCACGCAGCAGCAAGTGATAAAGGGCAAGGTCTACTTGGCCAGCG GCTGCTGGGGCTAA
Upstream 100 bases:
>100_bases CATCTTGGGCAGCGACGGCTTGACCAGAGAAGCCGCGGAGAGACTGGCGCGCACCACAGGAGTGATAAAGTGACCCTCAA AGGCCCCCGCGGAGGAAGTC
Downstream 100 bases:
>100_bases GCTTAATTTTTTGTGAGGGGCCCTCGCCCGGGCATCGAGGGTGTACGAGCTCCTCCGAGAGCTCCCCCCTTCCGAGGAGG TCTTACAACTCCTCCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSSPQKVQINKKLLVLASVAVAVIAGLGITFLVLSSKPPKAEVTQQERFGAPAEEVPKVSVEYPLEFVELEGAATAQPLT YPDEDGTAFLFVNTINETQEIWTIKGNKVVGKFEIKGPVVPVFDPRKGESATLDGKLLLGVNGTLYAIYGDEAEPLGKYA HSPDARVGIFVKKNDVYAWEVREEKLGNDTWVYCTLYDVLKDKVASNITFNLGANVSATNPLPDLLDGDGCLVLWLRKMS PIMYYHYKGKGGEAKGEEDLIKMKVATFAPIFLENEPYSSKPYFMLISLGERGTFVLRFHDILDNETVLYSLPGIYNFVG VGDYLGNGYVGDALFLVATRRGFEAYIFDVNNMYQNFTIGKLEPAVAVATGISLEPKVKRVFGLGNFTNTTITIKSNVGE LKFKVKNVPQEVSSLFITLTMGKRTCYTAVVNPTVGGLTTQQQVIKGKVYLASGCWG
Sequences:
>Translated_457_residues MSSPQKVQINKKLLVLASVAVAVIAGLGITFLVLSSKPPKAEVTQQERFGAPAEEVPKVSVEYPLEFVELEGAATAQPLT YPDEDGTAFLFVNTINETQEIWTIKGNKVVGKFEIKGPVVPVFDPRKGESATLDGKLLLGVNGTLYAIYGDEAEPLGKYA HSPDARVGIFVKKNDVYAWEVREEKLGNDTWVYCTLYDVLKDKVASNITFNLGANVSATNPLPDLLDGDGCLVLWLRKMS PIMYYHYKGKGGEAKGEEDLIKMKVATFAPIFLENEPYSSKPYFMLISLGERGTFVLRFHDILDNETVLYSLPGIYNFVG VGDYLGNGYVGDALFLVATRRGFEAYIFDVNNMYQNFTIGKLEPAVAVATGISLEPKVKRVFGLGNFTNTTITIKSNVGE LKFKVKNVPQEVSSLFITLTMGKRTCYTAVVNPTVGGLTTQQQVIKGKVYLASGCWG >Mature_456_residues SSPQKVQINKKLLVLASVAVAVIAGLGITFLVLSSKPPKAEVTQQERFGAPAEEVPKVSVEYPLEFVELEGAATAQPLTY PDEDGTAFLFVNTINETQEIWTIKGNKVVGKFEIKGPVVPVFDPRKGESATLDGKLLLGVNGTLYAIYGDEAEPLGKYAH SPDARVGIFVKKNDVYAWEVREEKLGNDTWVYCTLYDVLKDKVASNITFNLGANVSATNPLPDLLDGDGCLVLWLRKMSP IMYYHYKGKGGEAKGEEDLIKMKVATFAPIFLENEPYSSKPYFMLISLGERGTFVLRFHDILDNETVLYSLPGIYNFVGV GDYLGNGYVGDALFLVATRRGFEAYIFDVNNMYQNFTIGKLEPAVAVATGISLEPKVKRVFGLGNFTNTTITIKSNVGEL KFKVKNVPQEVSSLFITLTMGKRTCYTAVVNPTVGGLTTQQQVIKGKVYLASGCWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50118; Mature: 49987
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00214 FABP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPQKVQINKKLLVLASVAVAVIAGLGITFLVLSSKPPKAEVTQQERFGAPAEEVPKVS CCCCCEEEECCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCHHHCCEEE VEYPLEFVELEGAATAQPLTYPDEDGTAFLFVNTINETQEIWTIKGNKVVGKFEIKGPVV EECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEEEEECCCEE PVFDPRKGESATLDGKLLLGVNGTLYAIYGDEAEPLGKYAHSPDARVGIFVKKNDVYAWE EEECCCCCCCEEECCEEEEECCCEEEEEECCCCCHHHHHCCCCCCEEEEEEEECCEEEEE VREEKLGNDTWVYCTLYDVLKDKVASNITFNLGANVSATNPLPDLLDGDGCLVLWLRKMS EEHHHCCCCCEEEEEEHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEHHCC PIMYYHYKGKGGEAKGEEDLIKMKVATFAPIFLENEPYSSKPYFMLISLGERGTFVLRFH CEEEEEEECCCCCCCCCHHHEEEEHHHCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEE DILDNETVLYSLPGIYNFVGVGDYLGNGYVGDALFLVATRRGFEAYIFDVNNMYQNFTIG ECCCCCEEEEECCCHHHEEECCHHHCCCCCCCEEEEEEECCCCEEEEEEECHHHCCCCCC KLEPAVAVATGISLEPKVKRVFGLGNFTNTTITIKSNVGELKFKVKNVPQEVSSLFITLT CCCCCEEEEECCCCCCCHHEEEECCCCCCEEEEEECCCCEEEEEECCCCHHHCEEEEEEE MGKRTCYTAVVNPTVGGLTTQQQVIKGKVYLASGCWG ECCCEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCC >Mature Secondary Structure SSPQKVQINKKLLVLASVAVAVIAGLGITFLVLSSKPPKAEVTQQERFGAPAEEVPKVS CCCCEEEECCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCCCHHHCCEEE VEYPLEFVELEGAATAQPLTYPDEDGTAFLFVNTINETQEIWTIKGNKVVGKFEIKGPVV EECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEEEEECCCEE PVFDPRKGESATLDGKLLLGVNGTLYAIYGDEAEPLGKYAHSPDARVGIFVKKNDVYAWE EEECCCCCCCEEECCEEEEECCCEEEEEECCCCCHHHHHCCCCCCEEEEEEEECCEEEEE VREEKLGNDTWVYCTLYDVLKDKVASNITFNLGANVSATNPLPDLLDGDGCLVLWLRKMS EEHHHCCCCCEEEEEEHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEHHCC PIMYYHYKGKGGEAKGEEDLIKMKVATFAPIFLENEPYSSKPYFMLISLGERGTFVLRFH CEEEEEEECCCCCCCCCHHHEEEEHHHCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEE DILDNETVLYSLPGIYNFVGVGDYLGNGYVGDALFLVATRRGFEAYIFDVNNMYQNFTIG ECCCCCEEEEECCCHHHEEECCHHHCCCCCCCEEEEEEECCCCEEEEEEECHHHCCCCCC KLEPAVAVATGISLEPKVKRVFGLGNFTNTTITIKSNVGELKFKVKNVPQEVSSLFITLT CCCCCEEEEECCCCCCCHHEEEECCCCCCEEEEEECCCCEEEEEECCCCHHHCEEEEEEE MGKRTCYTAVVNPTVGGLTTQQQVIKGKVYLASGCWG ECCCEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA