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The map label for this gene is dtdA

Identifier: 156937940

GI number: 156937940

Start: 1028704

End: 1029441

Strand: Reverse

Name: dtdA

Synonym: Igni_1152

Alternate gene names: 156937940

Gene position: 1029441-1028704 (Counterclockwise)

Preceding gene: 156937942

Following gene: 156937939

Centisome position: 79.34

GC content: 61.92

Gene sequence:

>738_bases
TTGAAGGTAACAGTGGTTTACTACCCCGGGGACCCCGCTGCTAAGGGGGCGGCCGAGGCTCTGGAGAGGGAATACGGGAT
CAAGGCTTTGGAGCTGCCGGAGGACCCACCTTTCTTCGACTTCAACTCGCTCGCCGGCGATGCCTTCATCGTGCTTTCGA
GACATTCCAGCGAGAAGAGGGTGAAGGCATTCACAGTCCACCACACCGGCAACTTCGGGGAGGCGAAGCTGGGAGGGGAG
CCCAAGAGGCTCGGGGTCGCCTACCCCTCCCTCGCTTGCTCCTTGTTGAGGGCAATGAACGCCTTCCGGAGGGAGGGCTA
CGACGTGACTTACGAGGCTACCCACCACGGGCCCACCAGCGACAAGCCATTGGTCTTCGCCGAGATAGGCTCCGTGAAGG
AGGACTGGGAGGACCCGGCGAACCACGAGGTCTTGGCCAAGGCGGTGGCCTCGTGGGAGGAGCACCGCTGCGAGGCGCCC
AAGGCCGTTTGGGTTGGAGGCCCCCACTACTCCAAGAGGGCTACAAAGAGGTGCTTGGAGGGCGAGGCGTGCTTCGGCCA
CATTGCCCCTAAGTACGCCCTTGACCACTTGGACGAGGACTTGTTGAGGCAGATGGTGGAGAGGAGCTTCGAGAGGCCCG
AAAGGGCCTACGTGGAGAAGAAGTCCTTGAAGTCCGAGCTCAGGTTGAGGGTCGTCAAGGCTTTGGAGGACCTCGGCCTA
GAGGTCCTCGTGGTTTGA

Upstream 100 bases:

>100_bases
TCGAGAGGGTCGGCGACAAGATCTTGATCCGCTTGAAGTCGCGCTCCCTAGCCCTCAAGGTTCTTAGGACCCTCGAGGCG
GCCGGCCTGTTGGACGAGCC

Downstream 100 bases:

>100_bases
AGTTCAGAAATTATCCTTTTTTCGAGCCTGGGTTTAAAAAGGGTGTTAATATTTCTTTTGGTCTTCTGGCGAGTACCTTC
AATTCTAAAATGCTTTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKVTVVYYPGDPAAKGAAEALEREYGIKALELPEDPPFFDFNSLAGDAFIVLSRHSSEKRVKAFTVHHTGNFGEAKLGGE
PKRLGVAYPSLACSLLRAMNAFRREGYDVTYEATHHGPTSDKPLVFAEIGSVKEDWEDPANHEVLAKAVASWEEHRCEAP
KAVWVGGPHYSKRATKRCLEGEACFGHIAPKYALDHLDEDLLRQMVERSFERPERAYVEKKSLKSELRLRVVKALEDLGL
EVLVV

Sequences:

>Translated_245_residues
MKVTVVYYPGDPAAKGAAEALEREYGIKALELPEDPPFFDFNSLAGDAFIVLSRHSSEKRVKAFTVHHTGNFGEAKLGGE
PKRLGVAYPSLACSLLRAMNAFRREGYDVTYEATHHGPTSDKPLVFAEIGSVKEDWEDPANHEVLAKAVASWEEHRCEAP
KAVWVGGPHYSKRATKRCLEGEACFGHIAPKYALDHLDEDLLRQMVERSFERPERAYVEKKSLKSELRLRVVKALEDLGL
EVLVV
>Mature_245_residues
MKVTVVYYPGDPAAKGAAEALEREYGIKALELPEDPPFFDFNSLAGDAFIVLSRHSSEKRVKAFTVHHTGNFGEAKLGGE
PKRLGVAYPSLACSLLRAMNAFRREGYDVTYEATHHGPTSDKPLVFAEIGSVKEDWEDPANHEVLAKAVASWEEHRCEAP
KAVWVGGPHYSKRATKRCLEGEACFGHIAPKYALDHLDEDLLRQMVERSFERPERAYVEKKSLKSELRLRVVKALEDLGL
EVLVV

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_IGNH4 (A8ABM7)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435736.1
- ProteinModelPortal:   A8ABM7
- STRING:   A8ABM7
- GeneID:   5563080
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_1152
- eggNOG:   arNOG10590
- HOGENOM:   HBG626914
- OMA:   CYEATHH
- BioCyc:   IHOS453591:IGNI_1152-MONOMER
- HAMAP:   MF_00562
- InterPro:   IPR007508
- InterPro:   IPR018033
- PIRSF:   PIRSF016210

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 27362; Mature: 27362

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTVVYYPGDPAAKGAAEALEREYGIKALELPEDPPFFDFNSLAGDAFIVLSRHSSEKR
CEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHCCCCEEEEEECCCCCCE
VKAFTVHHTGNFGEAKLGGEPKRLGVAYPSLACSLLRAMNAFRREGYDVTYEATHHGPTS
EEEEEEEECCCCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
DKPLVFAEIGSVKEDWEDPANHEVLAKAVASWEEHRCEAPKAVWVGGPHYSKRATKRCLE
CCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
GEACFGHIAPKYALDHLDEDLLRQMVERSFERPERAYVEKKSLKSELRLRVVKALEDLGL
CCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
EVLVV
EEEEC
>Mature Secondary Structure
MKVTVVYYPGDPAAKGAAEALEREYGIKALELPEDPPFFDFNSLAGDAFIVLSRHSSEKR
CEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHCCCCEEEEEECCCCCCE
VKAFTVHHTGNFGEAKLGGEPKRLGVAYPSLACSLLRAMNAFRREGYDVTYEATHHGPTS
EEEEEEEECCCCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
DKPLVFAEIGSVKEDWEDPANHEVLAKAVASWEEHRCEAPKAVWVGGPHYSKRATKRCLE
CCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
GEACFGHIAPKYALDHLDEDLLRQMVERSFERPERAYVEKKSLKSELRLRVVKALEDLGL
CCCHHHHCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
EVLVV
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA